Gene Memar_1891 details

Gene Information

• Locus tag: Memar_1891
• ID: 4846400
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1886005
• End bp: 1886703
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640116597
• Product: hypothetical protein
• Protein accession: YP_001047799
• Protein GI: 126179834
• COG category: [R] General function prediction only
• COG ID: [COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCTCT ACCTTGGCAT CGACGACACC GACACACGCG AGTCCCGGGG AACCGGACGG 
CTCGCCCGCG CGATTGCAGC AGAACTCACC CGGTCCTACA CGGTAGCCGG AGTGACCCGG 
CACCAGCTCT TTGTCCATCC GGCTGTCCCC TACACCTCCC ATAACAGTTC CGCGGTCATC 
CACATCCGGG ATACCGGGAA CGGGACTGCA GCCGACGTCT TTGCGGCGGC AAAGGAACTG 
ATGCTCGCCG ATTTCATCGA GGGGAGCGAC CCCGGGATCT GCGTTGCCGC CGACCGGAAC 
ATCAACGGCG ACCTCTCCCA CTTCGGTCTC TCCGCGAAGA CGAGCGTCGT GACGCAGGAT 
CAGGCGCGAG GGCTCGCCCG CGAGGCCGGA ATCCTCCTCG AAGGGCTCGG CGGCACCGAA 
GACGGCGTGA TCGGTGCGCT TGCCGGGGTC GGGCTTGCGG CATCGGGCAA CGACGGCCGG 
TTCATCCAGA AGGGAACGAA CCGAGACCTC AGCGGCACCC AGACGGTCGC CGCGATCCTC 
GCTTCCGGCG TCGACCGGGT CATGACCCGG GACGGGGCGG CGGTCGGGGA AGGCACTATC 
AGCCTGCGAA AGTTCCCGAA GCCTGCCTGC GTCGGTGGGA AGGCGATCCT CTACGTCGAG 
CCGGACGGGG ATGCCTACCG CGATATCGTG ATGGGATGA 

 

Protein sequence

MTLYLGIDDT DTRESRGTGR LARAIAAELT RSYTVAGVTR HQLFVHPAVP YTSHNSSAVI 
HIRDTGNGTA ADVFAAAKEL MLADFIEGSD PGICVAADRN INGDLSHFGL SAKTSVVTQD 
QARGLAREAG ILLEGLGGTE DGVIGALAGV GLAASGNDGR FIQKGTNRDL SGTQTVAAIL 
ASGVDRVMTR DGAAVGEGTI SLRKFPKPAC VGGKAILYVE PDGDAYRDIV MG