Gene Memar_1874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1874 
Symbol 
ID4847521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1869816 
End bp1870751 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID640116580 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001047782 
Protein GI126179817 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAGAC GGGATATTCC AGCAGGAGAG AAGCAGTATG ATGTCGAGCA TCTGGCATCG 
AGACAGGACG TCGACGGCCT GATCGAGGCA CTGCAGAGCG GCAATCCGAC CGCACGCCGG
ACCGCCGCCC TCGGTCTCGG CGCGCTCGGG GAATGGCGGG GGGTGGATCC CCTCATCCGG
GCGCTCACCG ACCCGGTGCA GGACGTCCGG GAAGGGGCGG CGAACGCGCT CGTCATGGTC
GGGACACCGG CGGTCGAACC GCTGATCGAC GTCCTCGAGC GTCCGGGTGC TGCGGCCGGC
TACGGCCTTC CGCAGGAAGC GTCCGGGGAA GGGCTGACGC AGGTCGATCT CCTCGGGGGG
CCCGAAGGTA TACCGGCCAC GAAGAGGAGT CTCCGGCACA GGGGAGGCAT CAGGCAGCAC
GACGCGTTCG GCGGCCCGGA GGATGTCAGG AGAGCGGGAG GCGGAAGAAG GGGCCGCGAA
GAGGAGGAGG GGCTTGCCCA GCACGATGCA TTCGGCGGCC CGGAGGATCT CCGGAGGGCG
GGAGGCAAGG TATCCCGCGA CACCGAGGAT GAGATCACTC AGCACGATCT CTTCGGCGGC
CCCACGGATG TCGGGACGAA AAAGTCCCTC CGTCATCCAG AAATTGCGCA GCACGACCTC
TTCGGCGGTC CGGAGGACGC GAGGGAGCAC GAGACCCTCT TCCCCGGAGC AAGGAGGGCC
GGCGTCGTGA CGGAAGGCGC TGTTCCCGGC GCGAGCCTGC GCCGGGCTTA CGCCGCCGTC
ATCCTCGGCG AAATCGCCGA CCCGCGAGGA GAAGGGGCAC TCGGCCGGTC GCTTTCCGAC
ACCGACCCCG CCGTCCGGAG GTCGGCCGAA GACGGGATGG CGCGGTTCCG GCAGAAGCGC
GGGATGGCCG CACCCGTCCC GCCGGCGTCA AGATGA
 
Protein sequence
MQRRDIPAGE KQYDVEHLAS RQDVDGLIEA LQSGNPTARR TAALGLGALG EWRGVDPLIR 
ALTDPVQDVR EGAANALVMV GTPAVEPLID VLERPGAAAG YGLPQEASGE GLTQVDLLGG
PEGIPATKRS LRHRGGIRQH DAFGGPEDVR RAGGGRRGRE EEEGLAQHDA FGGPEDLRRA
GGKVSRDTED EITQHDLFGG PTDVGTKKSL RHPEIAQHDL FGGPEDAREH ETLFPGARRA
GVVTEGAVPG ASLRRAYAAV ILGEIADPRG EGALGRSLSD TDPAVRRSAE DGMARFRQKR
GMAAPVPPAS R