Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1874 |
Symbol | |
ID | 4847521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1869816 |
End bp | 1870751 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640116580 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_001047782 |
Protein GI | 126179817 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGAGAC GGGATATTCC AGCAGGAGAG AAGCAGTATG ATGTCGAGCA TCTGGCATCG AGACAGGACG TCGACGGCCT GATCGAGGCA CTGCAGAGCG GCAATCCGAC CGCACGCCGG ACCGCCGCCC TCGGTCTCGG CGCGCTCGGG GAATGGCGGG GGGTGGATCC CCTCATCCGG GCGCTCACCG ACCCGGTGCA GGACGTCCGG GAAGGGGCGG CGAACGCGCT CGTCATGGTC GGGACACCGG CGGTCGAACC GCTGATCGAC GTCCTCGAGC GTCCGGGTGC TGCGGCCGGC TACGGCCTTC CGCAGGAAGC GTCCGGGGAA GGGCTGACGC AGGTCGATCT CCTCGGGGGG CCCGAAGGTA TACCGGCCAC GAAGAGGAGT CTCCGGCACA GGGGAGGCAT CAGGCAGCAC GACGCGTTCG GCGGCCCGGA GGATGTCAGG AGAGCGGGAG GCGGAAGAAG GGGCCGCGAA GAGGAGGAGG GGCTTGCCCA GCACGATGCA TTCGGCGGCC CGGAGGATCT CCGGAGGGCG GGAGGCAAGG TATCCCGCGA CACCGAGGAT GAGATCACTC AGCACGATCT CTTCGGCGGC CCCACGGATG TCGGGACGAA AAAGTCCCTC CGTCATCCAG AAATTGCGCA GCACGACCTC TTCGGCGGTC CGGAGGACGC GAGGGAGCAC GAGACCCTCT TCCCCGGAGC AAGGAGGGCC GGCGTCGTGA CGGAAGGCGC TGTTCCCGGC GCGAGCCTGC GCCGGGCTTA CGCCGCCGTC ATCCTCGGCG AAATCGCCGA CCCGCGAGGA GAAGGGGCAC TCGGCCGGTC GCTTTCCGAC ACCGACCCCG CCGTCCGGAG GTCGGCCGAA GACGGGATGG CGCGGTTCCG GCAGAAGCGC GGGATGGCCG CACCCGTCCC GCCGGCGTCA AGATGA
|
Protein sequence | MQRRDIPAGE KQYDVEHLAS RQDVDGLIEA LQSGNPTARR TAALGLGALG EWRGVDPLIR ALTDPVQDVR EGAANALVMV GTPAVEPLID VLERPGAAAG YGLPQEASGE GLTQVDLLGG PEGIPATKRS LRHRGGIRQH DAFGGPEDVR RAGGGRRGRE EEEGLAQHDA FGGPEDLRRA GGKVSRDTED EITQHDLFGG PTDVGTKKSL RHPEIAQHDL FGGPEDAREH ETLFPGARRA GVVTEGAVPG ASLRRAYAAV ILGEIADPRG EGALGRSLSD TDPAVRRSAE DGMARFRQKR GMAAPVPPAS R
|
| |