| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1831 |
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| Symbol | |
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| ID | 4846112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1825899 |
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| End bp | 1829342 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116536 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001047739 |
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| Protein GI | 126179774 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACATCA CGCAGCTTGA GATCGACAAC TTCAAGTCTT TCGCCAGAAA GACGAAAATT
CCTTTTTTCG AAGGATTTAC AGTCGTCTCA GGCCCGAATG GTTCCGGAAA GAGCAATATT
ATCGACAGCC TCCTCTTCGT CCTGGCCCTT TCGGGTGCGC GGGGGCTGCG GGCCGAGAAG
CTGACCGATC TCATCAACGT CAATTCCGGG AAGAACACCG CTGAGGTGAC GGCCACGTTC
TCGGACGGCA CGACGATCCG CCGCCGGATC AAGCGGACGC CGACGGGATA CTACAGTTAC
AACTACTTGA ACAACCGTCT CTGCAAGCAG GGCGACGTCA TCGAGTTCCT CGCAAAGATC
GGGATCAAGC CGGAGGGCTA CAACGTCGTG ATGCAGGGTG ACATCACCCG CATCATGGAG
ATGACCGACG GCGAACGGCG GAAGATTATC GACGAGATAG CAGGTGTCGC TGAGTTCGAC
CACAAGCGCG GACAGGCGTT CTCGGAACTC GAGGTGGTGC GGGAGCGGCT CGAGCGCGAG
GAGCTTCTCT TGAACGAGCT CGTGGCGCGG CTGGATGCGC TCCAGCACGA GCGCGAGCAG
GCGGTGGAGT ACCGGCGGTG GCAGGGCGAG CTGGAACACC TCGGGCAGTG CCGGGGAGCG
GCGCTCGTCC GGCAGAAAGA GCAGGAGATC GGCACCCTTC ACGATCTCGC GCACGACCAG
CAGGCGGCAA TCGCACGCAC CGAGGGTGAG GGCGAGGCCG TCAAAAAAGA GATCGAGGAG
GCGCGCGAAC GCCAGCATGC CGTCGAAGAG GAGATAAACC ACAAAAGCGG CCCCGAGTAT
CTCGAACTCG TCGGACGGCT CGAAGAGGCG CGAAGCGCGA TCAAGCTCGG CGAGAAGACC
ATCGAACGGC TGAAGGTCAA CCGGGAAGAG AATGCCGAGG CGGTCCAGCG GATCTACCTT
GATGGCAAAC GCGCCGAGGC GAAAGTCGAG GAGTGCGCCA CGCAGATCCG CAACCTCTCG
ATAGACCGGG CGAATCTTGC CATGGAGCTC GCGACGCAGC GCGACGAGAT GAAAACGGTC
GAGGAGCGTA TCGCAAGCGA GAGCAAAGAG GTCGAAGGGG TAAAAGACCA GCTCTTCGAG
AGGATGGAGG ATCTCGAGAG CAAAAAGGAG CTCCGGTCGA AGATCCTCCG CGAGCAGGAT
ATCTTCATCG AGAAGAGCCG GATGCGGACG TCGGAACGGG AACGCCTGGA CGCGCGTATC
GCCCAGATCG AGGAGGAACT CACGAACAAG CAGGAGCAGG TCGCGGAGTA CTCCTCCTGC
ATGGCCGACT GCGAGGAACA GAAACGCCAG ATCGAGCGGG CTCTCTCCGA GGCGGAAAGC
ACGCTCTTTG CGCGGCGGTC GGCGCTCGAT CGGCTGAAGA AAGAGATCCG GGAGAACGAG
CAGAACCTGA TGCGCCTGGA GGCGCAGCAG CAGGCGCACG GCGATGCCGG CGGGAAGGCG
ATGGACGTCG TTCTCGGCAT GGAAGGTGTC CACGGCACCG TTGCGCAGCT CGGGCGGGCG
CCGCCGGAGT ACGCGACCGC GCTCGACGTG GCGGCGATGG GCCGGCTCAG GTGGGCCATC
GTCGATACCG ACGCGGTTGC GTCCGATGCG ATCCGCTACT TAAAAGAGAA CCGGCTCGGG
CGGGTCACGT TCCTGCCGCT CAACAAACTC CGGCCCCCGA TCCTCTCGCC GCTCGAGGCC
GATCCGGGCA TCGTCGGCTA CGCGGTCGAT CTCCTGGAGT TCGACCCGGC GTTCGACCGC
GCGTTCCGTG TCGTCTTCGG CGCGACGGTG GTGGTGGATA CCCTCGAGCG GGCGCGGCGG
CTGATGGGCC GGTACAAGAT GGTCACCCTG GAGGGCGATT TCGTCGAGAG GAGCGGCGCC
ATGACCGGCG GATCACAGGG GAAGAAGATC CGCGGGTTCG GGGTGGCCGT CGACGACGAG
GTCGCGCGGG TCCGCGCGAA GCTCGCCGAA CTCGAGGCGG AAGCGGGCGA GATCGAAGCG
TCCATCGGCC GCTTTGCCGT GGCCGCGGAG GCAAAGCGGG CGGAGCGGAG TTCGATCGAC
GAGCAGGTTG CGCGCTACCG CATGCTGGTG GACGAGTTCC AGAAGCGGAT CGAGGTGCTT
TCCGGCGAGA AACGGACGCT CGAAGAGAGC CTGCATGAGA TGCTCGATGC CGCGAAGACC
GGCGGCGAGG AACTTGCGCG GCTCGAGGCC GATCTCGAGC GGATAACCGG CGAGATCGCG
CAGGTATCGG CGGAGGTCGA CGACCTCAAG AAGAAGCTCG ACGACACCGA GGTTCCCGTG
CTCACCGAGC GGTACGAGAG CATCCGTAAG GCGGTGGAGG ATATCGAGCG GCGGCTCCGG
AACAAGGACG CCGACATCAC CGACGCCAAA CGCGAGCGGC AGCATTTCGC AAACCGTATC
GAGGAACTTG CCGCGGAACG GAGCCGCCTG GAGACGAAGA ACCAGGAGAT CGACGGTGAG
ATCACCGCAA CGGAGGAGCA GATCGAGGAT CAGCGCCGCC TGATCGTGCA GTTCGAGGCG
CGCCAGAAGG AGTTCTCCGA CGAACTTGCA GGCCTGCACG AGAAGCGCGA CCGGATCCTC
GAGGAGATCC GGGTGCTCGA CCAGCGGGCT CTCGAACTCT CGGGTGCGAT GGAGCGCATC
CGGATGCAGA TCAGCGCCCT CGAGGAGCGG GAACGGTCGC TCCTCGCGGA ACTCGCGGTG
CTCCGGGAGC AGGCCGGCGA CGTGGAGACG GATCTCGACA TCGCCGCCAT CGACGCCGGG
ATCGCGGAGG CCGAGCGGGC GCTAAAGAAG ATCGGTGCGG TGAACATGCT CGCGATCGAG
GAGTGCGACC GTGTCGCTGC CCGCGTCGAG GAGCGGACGG AGAAGAAAGA GGTGCTCTCG
CGGGAGCGGA TGATGCTCCT TGAGCGGATC GAGAAGTACG AGAAGTTGAA GTACGACGCC
TTCATGACCG CTTTCACCGC GATCGATGGG AACTTCCGCG ACATCTTCGC GCGCCTGACC
GACGGGACCG GGAGGCTGAT CCTCGATAAC GAAGAGGATC CCTTCGCCGG CGGCATGACG
TTCGCGGTTC AGCCGCGCGA CAAGAAGGTT CACCTCCTCT CTTCGCTCTC CGGGGGCGAG
AAGTCGCTGA CCACGCTCGC GTTCATCTTC TCCATCCAGC AGTTCATGCC CGCGCCGTTC
TACGCGCTCG ATGAGGTGGA TATGTTCCTC GACGGGAACA ACGTCGGCCG CATTGCCGCC
ATGATGAGCG AGCTCTCGGG GAGCGCGCAG TCGATCATCG TTTCGCTCCG AAAGCCGATG
ATCGAGCGCG CCGACCGCAT CGTGGGCGTG ACGATCCGTG CCGACAAGAG CACCTACGTG
ACCGGTGTGC AGAACAATGG ATGA
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| Protein sequence | MYITQLEIDN FKSFARKTKI PFFEGFTVVS GPNGSGKSNI IDSLLFVLAL SGARGLRAEK
LTDLINVNSG KNTAEVTATF SDGTTIRRRI KRTPTGYYSY NYLNNRLCKQ GDVIEFLAKI
GIKPEGYNVV MQGDITRIME MTDGERRKII DEIAGVAEFD HKRGQAFSEL EVVRERLERE
ELLLNELVAR LDALQHEREQ AVEYRRWQGE LEHLGQCRGA ALVRQKEQEI GTLHDLAHDQ
QAAIARTEGE GEAVKKEIEE ARERQHAVEE EINHKSGPEY LELVGRLEEA RSAIKLGEKT
IERLKVNREE NAEAVQRIYL DGKRAEAKVE ECATQIRNLS IDRANLAMEL ATQRDEMKTV
EERIASESKE VEGVKDQLFE RMEDLESKKE LRSKILREQD IFIEKSRMRT SERERLDARI
AQIEEELTNK QEQVAEYSSC MADCEEQKRQ IERALSEAES TLFARRSALD RLKKEIRENE
QNLMRLEAQQ QAHGDAGGKA MDVVLGMEGV HGTVAQLGRA PPEYATALDV AAMGRLRWAI
VDTDAVASDA IRYLKENRLG RVTFLPLNKL RPPILSPLEA DPGIVGYAVD LLEFDPAFDR
AFRVVFGATV VVDTLERARR LMGRYKMVTL EGDFVERSGA MTGGSQGKKI RGFGVAVDDE
VARVRAKLAE LEAEAGEIEA SIGRFAVAAE AKRAERSSID EQVARYRMLV DEFQKRIEVL
SGEKRTLEES LHEMLDAAKT GGEELARLEA DLERITGEIA QVSAEVDDLK KKLDDTEVPV
LTERYESIRK AVEDIERRLR NKDADITDAK RERQHFANRI EELAAERSRL ETKNQEIDGE
ITATEEQIED QRRLIVQFEA RQKEFSDELA GLHEKRDRIL EEIRVLDQRA LELSGAMERI
RMQISALEER ERSLLAELAV LREQAGDVET DLDIAAIDAG IAEAERALKK IGAVNMLAIE
ECDRVAARVE ERTEKKEVLS RERMMLLERI EKYEKLKYDA FMTAFTAIDG NFRDIFARLT
DGTGRLILDN EEDPFAGGMT FAVQPRDKKV HLLSSLSGGE KSLTTLAFIF SIQQFMPAPF
YALDEVDMFL DGNNVGRIAA MMSELSGSAQ SIIVSLRKPM IERADRIVGV TIRADKSTYV
TGVQNNG
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