Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1831 |
Symbol | |
ID | 4846112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1825899 |
End bp | 1829342 |
Gene Length | 3444 bp |
Protein Length | 1147 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640116536 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001047739 |
Protein GI | 126179774 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTACATCA CGCAGCTTGA GATCGACAAC TTCAAGTCTT TCGCCAGAAA GACGAAAATT CCTTTTTTCG AAGGATTTAC AGTCGTCTCA GGCCCGAATG GTTCCGGAAA GAGCAATATT ATCGACAGCC TCCTCTTCGT CCTGGCCCTT TCGGGTGCGC GGGGGCTGCG GGCCGAGAAG CTGACCGATC TCATCAACGT CAATTCCGGG AAGAACACCG CTGAGGTGAC GGCCACGTTC TCGGACGGCA CGACGATCCG CCGCCGGATC AAGCGGACGC CGACGGGATA CTACAGTTAC AACTACTTGA ACAACCGTCT CTGCAAGCAG GGCGACGTCA TCGAGTTCCT CGCAAAGATC GGGATCAAGC CGGAGGGCTA CAACGTCGTG ATGCAGGGTG ACATCACCCG CATCATGGAG ATGACCGACG GCGAACGGCG GAAGATTATC GACGAGATAG CAGGTGTCGC TGAGTTCGAC CACAAGCGCG GACAGGCGTT CTCGGAACTC GAGGTGGTGC GGGAGCGGCT CGAGCGCGAG GAGCTTCTCT TGAACGAGCT CGTGGCGCGG CTGGATGCGC TCCAGCACGA GCGCGAGCAG GCGGTGGAGT ACCGGCGGTG GCAGGGCGAG CTGGAACACC TCGGGCAGTG CCGGGGAGCG GCGCTCGTCC GGCAGAAAGA GCAGGAGATC GGCACCCTTC ACGATCTCGC GCACGACCAG CAGGCGGCAA TCGCACGCAC CGAGGGTGAG GGCGAGGCCG TCAAAAAAGA GATCGAGGAG GCGCGCGAAC GCCAGCATGC CGTCGAAGAG GAGATAAACC ACAAAAGCGG CCCCGAGTAT CTCGAACTCG TCGGACGGCT CGAAGAGGCG CGAAGCGCGA TCAAGCTCGG CGAGAAGACC ATCGAACGGC TGAAGGTCAA CCGGGAAGAG AATGCCGAGG CGGTCCAGCG GATCTACCTT GATGGCAAAC GCGCCGAGGC GAAAGTCGAG GAGTGCGCCA CGCAGATCCG CAACCTCTCG ATAGACCGGG CGAATCTTGC CATGGAGCTC GCGACGCAGC GCGACGAGAT GAAAACGGTC GAGGAGCGTA TCGCAAGCGA GAGCAAAGAG GTCGAAGGGG TAAAAGACCA GCTCTTCGAG AGGATGGAGG ATCTCGAGAG CAAAAAGGAG CTCCGGTCGA AGATCCTCCG CGAGCAGGAT ATCTTCATCG AGAAGAGCCG GATGCGGACG TCGGAACGGG AACGCCTGGA CGCGCGTATC GCCCAGATCG AGGAGGAACT CACGAACAAG CAGGAGCAGG TCGCGGAGTA CTCCTCCTGC ATGGCCGACT GCGAGGAACA GAAACGCCAG ATCGAGCGGG CTCTCTCCGA GGCGGAAAGC ACGCTCTTTG CGCGGCGGTC GGCGCTCGAT CGGCTGAAGA AAGAGATCCG GGAGAACGAG CAGAACCTGA TGCGCCTGGA GGCGCAGCAG CAGGCGCACG GCGATGCCGG CGGGAAGGCG ATGGACGTCG TTCTCGGCAT GGAAGGTGTC CACGGCACCG TTGCGCAGCT CGGGCGGGCG CCGCCGGAGT ACGCGACCGC GCTCGACGTG GCGGCGATGG GCCGGCTCAG GTGGGCCATC GTCGATACCG ACGCGGTTGC GTCCGATGCG ATCCGCTACT TAAAAGAGAA CCGGCTCGGG CGGGTCACGT TCCTGCCGCT CAACAAACTC CGGCCCCCGA TCCTCTCGCC GCTCGAGGCC GATCCGGGCA TCGTCGGCTA CGCGGTCGAT CTCCTGGAGT TCGACCCGGC GTTCGACCGC GCGTTCCGTG TCGTCTTCGG CGCGACGGTG GTGGTGGATA CCCTCGAGCG GGCGCGGCGG CTGATGGGCC GGTACAAGAT GGTCACCCTG GAGGGCGATT TCGTCGAGAG GAGCGGCGCC ATGACCGGCG GATCACAGGG GAAGAAGATC CGCGGGTTCG GGGTGGCCGT CGACGACGAG GTCGCGCGGG TCCGCGCGAA GCTCGCCGAA CTCGAGGCGG AAGCGGGCGA GATCGAAGCG TCCATCGGCC GCTTTGCCGT GGCCGCGGAG GCAAAGCGGG CGGAGCGGAG TTCGATCGAC GAGCAGGTTG CGCGCTACCG CATGCTGGTG GACGAGTTCC AGAAGCGGAT CGAGGTGCTT TCCGGCGAGA AACGGACGCT CGAAGAGAGC CTGCATGAGA TGCTCGATGC CGCGAAGACC GGCGGCGAGG AACTTGCGCG GCTCGAGGCC GATCTCGAGC GGATAACCGG CGAGATCGCG CAGGTATCGG CGGAGGTCGA CGACCTCAAG AAGAAGCTCG ACGACACCGA GGTTCCCGTG CTCACCGAGC GGTACGAGAG CATCCGTAAG GCGGTGGAGG ATATCGAGCG GCGGCTCCGG AACAAGGACG CCGACATCAC CGACGCCAAA CGCGAGCGGC AGCATTTCGC AAACCGTATC GAGGAACTTG CCGCGGAACG GAGCCGCCTG GAGACGAAGA ACCAGGAGAT CGACGGTGAG ATCACCGCAA CGGAGGAGCA GATCGAGGAT CAGCGCCGCC TGATCGTGCA GTTCGAGGCG CGCCAGAAGG AGTTCTCCGA CGAACTTGCA GGCCTGCACG AGAAGCGCGA CCGGATCCTC GAGGAGATCC GGGTGCTCGA CCAGCGGGCT CTCGAACTCT CGGGTGCGAT GGAGCGCATC CGGATGCAGA TCAGCGCCCT CGAGGAGCGG GAACGGTCGC TCCTCGCGGA ACTCGCGGTG CTCCGGGAGC AGGCCGGCGA CGTGGAGACG GATCTCGACA TCGCCGCCAT CGACGCCGGG ATCGCGGAGG CCGAGCGGGC GCTAAAGAAG ATCGGTGCGG TGAACATGCT CGCGATCGAG GAGTGCGACC GTGTCGCTGC CCGCGTCGAG GAGCGGACGG AGAAGAAAGA GGTGCTCTCG CGGGAGCGGA TGATGCTCCT TGAGCGGATC GAGAAGTACG AGAAGTTGAA GTACGACGCC TTCATGACCG CTTTCACCGC GATCGATGGG AACTTCCGCG ACATCTTCGC GCGCCTGACC GACGGGACCG GGAGGCTGAT CCTCGATAAC GAAGAGGATC CCTTCGCCGG CGGCATGACG TTCGCGGTTC AGCCGCGCGA CAAGAAGGTT CACCTCCTCT CTTCGCTCTC CGGGGGCGAG AAGTCGCTGA CCACGCTCGC GTTCATCTTC TCCATCCAGC AGTTCATGCC CGCGCCGTTC TACGCGCTCG ATGAGGTGGA TATGTTCCTC GACGGGAACA ACGTCGGCCG CATTGCCGCC ATGATGAGCG AGCTCTCGGG GAGCGCGCAG TCGATCATCG TTTCGCTCCG AAAGCCGATG ATCGAGCGCG CCGACCGCAT CGTGGGCGTG ACGATCCGTG CCGACAAGAG CACCTACGTG ACCGGTGTGC AGAACAATGG ATGA
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Protein sequence | MYITQLEIDN FKSFARKTKI PFFEGFTVVS GPNGSGKSNI IDSLLFVLAL SGARGLRAEK LTDLINVNSG KNTAEVTATF SDGTTIRRRI KRTPTGYYSY NYLNNRLCKQ GDVIEFLAKI GIKPEGYNVV MQGDITRIME MTDGERRKII DEIAGVAEFD HKRGQAFSEL EVVRERLERE ELLLNELVAR LDALQHEREQ AVEYRRWQGE LEHLGQCRGA ALVRQKEQEI GTLHDLAHDQ QAAIARTEGE GEAVKKEIEE ARERQHAVEE EINHKSGPEY LELVGRLEEA RSAIKLGEKT IERLKVNREE NAEAVQRIYL DGKRAEAKVE ECATQIRNLS IDRANLAMEL ATQRDEMKTV EERIASESKE VEGVKDQLFE RMEDLESKKE LRSKILREQD IFIEKSRMRT SERERLDARI AQIEEELTNK QEQVAEYSSC MADCEEQKRQ IERALSEAES TLFARRSALD RLKKEIRENE QNLMRLEAQQ QAHGDAGGKA MDVVLGMEGV HGTVAQLGRA PPEYATALDV AAMGRLRWAI VDTDAVASDA IRYLKENRLG RVTFLPLNKL RPPILSPLEA DPGIVGYAVD LLEFDPAFDR AFRVVFGATV VVDTLERARR LMGRYKMVTL EGDFVERSGA MTGGSQGKKI RGFGVAVDDE VARVRAKLAE LEAEAGEIEA SIGRFAVAAE AKRAERSSID EQVARYRMLV DEFQKRIEVL SGEKRTLEES LHEMLDAAKT GGEELARLEA DLERITGEIA QVSAEVDDLK KKLDDTEVPV LTERYESIRK AVEDIERRLR NKDADITDAK RERQHFANRI EELAAERSRL ETKNQEIDGE ITATEEQIED QRRLIVQFEA RQKEFSDELA GLHEKRDRIL EEIRVLDQRA LELSGAMERI RMQISALEER ERSLLAELAV LREQAGDVET DLDIAAIDAG IAEAERALKK IGAVNMLAIE ECDRVAARVE ERTEKKEVLS RERMMLLERI EKYEKLKYDA FMTAFTAIDG NFRDIFARLT DGTGRLILDN EEDPFAGGMT FAVQPRDKKV HLLSSLSGGE KSLTTLAFIF SIQQFMPAPF YALDEVDMFL DGNNVGRIAA MMSELSGSAQ SIIVSLRKPM IERADRIVGV TIRADKSTYV TGVQNNG
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