| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1826 |
|---|
| Symbol | |
|---|
| ID | 4847558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1814265 |
|---|
| End bp | 1815575 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640116526 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_001047734 |
|---|
| Protein GI | 126179769 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAACG AGGATCGGGA CGCCCCGACT CCCGGAACGA AACTCCGGCG CGAGCTGGGC
CTTCCCGCAG TCACCCTCTC GGGCGTCGGG ATCATTCTCG GGGCAGGAAT CTATGCCCTG
CTCGGGGAAG CGGCCGGCAT GGCCGGCAAC GCCGTCTGGC TGACGTTCGC CGTCGCCGCC
GCCATCGCCG GGTTCAGCGC ACTAGGTTAC GCCGAACTCT CGTCGATGTA CCCCCGTGCG
AGCGCCGAGT TCGAGTATGT CAGAAACGCC TTCGGGAGGA GGCTTGCGTT CGTCGTCGGG
TGGCTGATCA TCTTCTCCGG CATCCTCGGG GCCGCAACCG TCTCGCTCGG GTTTGCCGGC
TACTTCTCGG ATCTCGTCGG CTTCCCGCGC GTCCCCTCCG CCGTCCTGAT CATCCTCGTC
CTTGCCGGGA TCCTTTTCTA CGGCATCAAG GAGACCGCCC GGGCCGCCAT CGCCATGACC
CTCATCGAGG TAGGAGGGAT CGTCATGGTC ATCCTGATCG GTCTTCCGCA CCTCGGGCGG
GTGGATTACT TCGATATGCC CCTCGGGGTT CCGGGCCTCC TGCAGGCATC CGCACTCGTC
TTTTTTGCCT ATATGGGATT CGAGGAGATG GTGAAACTCT CGGAGGAGAC CAGAAACCCG
GAACGAACCA TCCCCATAGC CCTGATGATC GCGCTTGCCG TCTCCGTCAT CCTCTATATC
CTGGTCTCTC TCGCCGCCGT GTCGGTCGTC GGGTGGGAGC AGCTCGCCGC ATCCCGGGCG
CCTTTCGCCG ACGTCGCGGC CGTCGCTCTC GGCCCTGCGG CGTTCACTCT CATCTCCATC
ATCGCCCTCT TTGCCACGGC AAACACCGCT CTCCTGATGA TGATGGCGTC GTCCCGGATC
ATGTACGGGA TGGCATCCTC CTTCTCGCTC CCGCCTATCC TCGCCCGGGT CCACCCCCGG
ACACGGACGC CATGGACGGC CATCGTCGCC GTTGCGCTTG CCTCCATCGC GTTCCTCTTT
GCAGGCAAGA TCGACTTCGT CGCAAACGTC ACGAACTTCA CGCTCTTCGT GACGTTCGCC
GTCATCAACG CGTCCGTTAT TCTGCTTCGC TACCGTGCGC CGGATGCGCC CCGGCCGTTC
CGGATACCAG GCAGCATCGG CAGGTTCCCG GTCATCCCGG CCGTCGGCAT CGCCTCGACG
CTCCTTCTCC TCGCCCAGCT TGAGTCTCTG GTGCTGCTGG TCGGCGGGAT CGTGGTCGTT
GTCGGTGCGG CGATCGCCCT GGTCGGGGAG CGGCGGTCGG CCGCCGCCTA A
|
|---|
| Protein sequence | MANEDRDAPT PGTKLRRELG LPAVTLSGVG IILGAGIYAL LGEAAGMAGN AVWLTFAVAA
AIAGFSALGY AELSSMYPRA SAEFEYVRNA FGRRLAFVVG WLIIFSGILG AATVSLGFAG
YFSDLVGFPR VPSAVLIILV LAGILFYGIK ETARAAIAMT LIEVGGIVMV ILIGLPHLGR
VDYFDMPLGV PGLLQASALV FFAYMGFEEM VKLSEETRNP ERTIPIALMI ALAVSVILYI
LVSLAAVSVV GWEQLAASRA PFADVAAVAL GPAAFTLISI IALFATANTA LLMMMASSRI
MYGMASSFSL PPILARVHPR TRTPWTAIVA VALASIAFLF AGKIDFVANV TNFTLFVTFA
VINASVILLR YRAPDAPRPF RIPGSIGRFP VIPAVGIAST LLLLAQLESL VLLVGGIVVV
VGAAIALVGE RRSAAA
|
|---|
| |