| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1805 |
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| Symbol | rpl13p |
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| ID | 4847550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1795522 |
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| End bp | 1795944 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640116504 |
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| Product | 50S ribosomal protein L13P |
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| Protein accession | YP_001047713 |
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| Protein GI | 126179748 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01077] ribosomal protein L13, archaeal/eukaryotic |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.602671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTACAG TTATCGACGC AGACGGATTA CTGCTCGGAA GGATGGCCAG CATCGTCGCG
CAGCGTGCGC TTGCCGGCGA GGAGATCGCC ATCGTGAACG TGGAAAAGGC GATCGTCTCC
GGAAGCAGGG CGCAGGTGCT CGCGAACTAC ACCACAAAGC GCGAGCGCGG ATCCCGCGAG
GGCGGCCCGT TCTTCCCGCG CAGGCCCGAC CATATCGTCA AGCGCACCAT CCGCGGGATG
CTCCCGTACA AACGCGAGCG CGGTATCGCG GCATTCAAGC GGATCAAGAC CTACGTCGGC
GTTCCGATGG AGTTCGCCGG GATGGAGACG GAGACGCTCG AAGCGGCCCA CATCGATCGG
CTGGGCAACA CGAGATACGT GACGATCGGG GCAATAAGCA CCAACCTCGG AGCAAAATAC
TAA
|
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| Protein sequence | MVTVIDADGL LLGRMASIVA QRALAGEEIA IVNVEKAIVS GSRAQVLANY TTKRERGSRE
GGPFFPRRPD HIVKRTIRGM LPYKRERGIA AFKRIKTYVG VPMEFAGMET ETLEAAHIDR
LGNTRYVTIG AISTNLGAKY
|
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