Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1798 |
Symbol | |
ID | 4847392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1789999 |
End bp | 1790781 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640116496 |
Product | signal-transduction protein |
Protein accession | YP_001047706 |
Protein GI | 126179741 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.961351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA GATTTCAGGT ACTCGTCAAA GACGTGATGG CAAAACCGAT CACCATCGCG AAGTCCGCCT TTGTCAGCGA AGCGCTCGAT AAGATGCTTG GCGAAGGCGT CGATCCGCTT ATCGTGACCA ACAACGGCAC GGTCATCGGA ACGACGTCCC GCGCGGCAAT CGCTGAGACG CTCGGGAGCA GGAAGACCCA GGCGCTGAAG GCCACATCCA TTCATGTCGC GAACACGGTC GAGGAAGACT TCACCTCCGC GTATCCCGAC CAGAGCATCG ACATTCTGGT GCCGCTGCTC CAGCACTACA AGCTGGTCGT GGTCTTCGAT GCCGAGCACC GCCTGATCGG GCAGGTGACG GCGGGCGACA TCCTGAAGGT GCTCCGCCCG GCGGGCGGCA TCCTCGACGT CATGGAGCCG GCGCACACCA TTCAGGGCGA GGAACGCGCC GTCCACCTCC GCCGCAGGAT GCTTGACGGC GAGATCGACC GGTTCATCGT CGAGGACGGC GACAGAGTCC TCGGCATCGT CACGGAGACC GATGTCGCAA AAGCGCTCCA TGCGTTCAAG GATCTCGTGG AGGGGACGCA CCAGGACTAC CGGATCAGGA ACCTCCTCGT GCGTGACATC ATGACCGCGC CCCTGATCTC GATGGACGCG GATACGGATG TCTCCGACGT CATCGACCTG ATGCTCAAGA AGAACATCAG TTCCGTCCCG ATCAAACAGA ACGGCAAGAT CACGGGCGTC GCGACCCGGA ACTCACTCAT CCAGGCCCTG TGA
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Protein sequence | MSDRFQVLVK DVMAKPITIA KSAFVSEALD KMLGEGVDPL IVTNNGTVIG TTSRAAIAET LGSRKTQALK ATSIHVANTV EEDFTSAYPD QSIDILVPLL QHYKLVVVFD AEHRLIGQVT AGDILKVLRP AGGILDVMEP AHTIQGEERA VHLRRRMLDG EIDRFIVEDG DRVLGIVTET DVAKALHAFK DLVEGTHQDY RIRNLLVRDI MTAPLISMDA DTDVSDVIDL MLKKNISSVP IKQNGKITGV ATRNSLIQAL
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