Gene Memar_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1798 
Symbol 
ID4847392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1789999 
End bp1790781 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID640116496 
Productsignal-transduction protein 
Protein accessionYP_001047706 
Protein GI126179741 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.961351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA GATTTCAGGT ACTCGTCAAA GACGTGATGG CAAAACCGAT CACCATCGCG 
AAGTCCGCCT TTGTCAGCGA AGCGCTCGAT AAGATGCTTG GCGAAGGCGT CGATCCGCTT
ATCGTGACCA ACAACGGCAC GGTCATCGGA ACGACGTCCC GCGCGGCAAT CGCTGAGACG
CTCGGGAGCA GGAAGACCCA GGCGCTGAAG GCCACATCCA TTCATGTCGC GAACACGGTC
GAGGAAGACT TCACCTCCGC GTATCCCGAC CAGAGCATCG ACATTCTGGT GCCGCTGCTC
CAGCACTACA AGCTGGTCGT GGTCTTCGAT GCCGAGCACC GCCTGATCGG GCAGGTGACG
GCGGGCGACA TCCTGAAGGT GCTCCGCCCG GCGGGCGGCA TCCTCGACGT CATGGAGCCG
GCGCACACCA TTCAGGGCGA GGAACGCGCC GTCCACCTCC GCCGCAGGAT GCTTGACGGC
GAGATCGACC GGTTCATCGT CGAGGACGGC GACAGAGTCC TCGGCATCGT CACGGAGACC
GATGTCGCAA AAGCGCTCCA TGCGTTCAAG GATCTCGTGG AGGGGACGCA CCAGGACTAC
CGGATCAGGA ACCTCCTCGT GCGTGACATC ATGACCGCGC CCCTGATCTC GATGGACGCG
GATACGGATG TCTCCGACGT CATCGACCTG ATGCTCAAGA AGAACATCAG TTCCGTCCCG
ATCAAACAGA ACGGCAAGAT CACGGGCGTC GCGACCCGGA ACTCACTCAT CCAGGCCCTG
TGA
 
Protein sequence
MSDRFQVLVK DVMAKPITIA KSAFVSEALD KMLGEGVDPL IVTNNGTVIG TTSRAAIAET 
LGSRKTQALK ATSIHVANTV EEDFTSAYPD QSIDILVPLL QHYKLVVVFD AEHRLIGQVT
AGDILKVLRP AGGILDVMEP AHTIQGEERA VHLRRRMLDG EIDRFIVEDG DRVLGIVTET
DVAKALHAFK DLVEGTHQDY RIRNLLVRDI MTAPLISMDA DTDVSDVIDL MLKKNISSVP
IKQNGKITGV ATRNSLIQAL