Gene Memar_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1750 
Symbol 
ID4847964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1747097 
End bp1748185 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content66% 
IMG OID640116448 
ProductOuter membrane lipoprotein-sorting protein-like protein 
Protein accessionYP_001047658 
Protein GI126179693 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATT TAGCACTCGT GCTCCTCCTC CTCGCCTGCA CCGCCGGGTG CCTCGACACC 
GCTGCGGATC CGCCGCCGGC GGACGAGATT GCCGCCCGGT TCATCGCGGC AGAGGAGCAG
GCGACGGACT TCACCGCCAC CGTGGCGGTA ACGGCCGGTT CCGAGAACGT CACCGTCAGG
CTGTTCCGGA AAGCCCCCGA GAACTACCGG CTGGAGTTCC TCGAGCCCGC GGACCTCGCG
GGGACGGTCG TCGTCTCGAA CGGCACCCGG AAGTGGCGCT ACGACCCGGC AACCCGGACG
GCGCTGACGG TCGCGGGGCC GTATATGAAT GCTGCCTTCT CCGGGCCGCC CTACCCCGGC
TGGGCGGAGG GGGTCCGGGG GTATGCGGAG ACGGTCGCCG GATCGCTTTC CGAGCAGAAC
GCCTCCTACC TGGGCAGCGA GACCATAGGC GGCCGGACCG CCTATATCCT TGAGGTCACG
GGTGACTCGA AGATCTTCGA GGCGCCCACC CGCTACCGGG AGGCGGTTCA CCGCTTCAGG
GTATGGATCG ACGCCGAAAC CTGGCTCCTC CTCGGCCTGG AGATGTACGG CAACGAGGGG
AACCTGATCC TCTCTGCCGA ATACACCGAT CCCTCGGCGA ACACCGGGCT CCCGGACGAC
ATCTTCGTCT TCGACCCGCC GGCAGGCGTC GAGGTCCGGC CGATGCCGAC GGCCGCGATC
ACACCGCTCT TCCTCTGGAG CATCCAAGAC GCCCGGCGCT ATGGTGTGGA GATGCCGTCC
TACCTCCCGG AAGGTTATGT CTTCAAAGAA GGGGTGCATC TTCCCGGGGC CTATACTACA
CTCCGGTTCA CGGACGGGAG CAATGAACTT ACGTTTGAGC GGCGGCTGCA CGACCCCTAC
CGGGAGGAAG CGGGGCTGCC TGGCACGCCC GAGCCCGTCC TCCTCGCCGA TGGGCGGGAG
GCCGAATACC TCTCCGCCGA TGGGCGGGAT CAGTTCTGCT GGAGTGCCGG GGGATACACC
TGCCTACTCA CGGCCGACAT GCTCGGCAAA GATGAACTCG TGCGGATGGC GGAATCGGTG
GGGGTGTAG
 
Protein sequence
MKHLALVLLL LACTAGCLDT AADPPPADEI AARFIAAEEQ ATDFTATVAV TAGSENVTVR 
LFRKAPENYR LEFLEPADLA GTVVVSNGTR KWRYDPATRT ALTVAGPYMN AAFSGPPYPG
WAEGVRGYAE TVAGSLSEQN ASYLGSETIG GRTAYILEVT GDSKIFEAPT RYREAVHRFR
VWIDAETWLL LGLEMYGNEG NLILSAEYTD PSANTGLPDD IFVFDPPAGV EVRPMPTAAI
TPLFLWSIQD ARRYGVEMPS YLPEGYVFKE GVHLPGAYTT LRFTDGSNEL TFERRLHDPY
REEAGLPGTP EPVLLADGRE AEYLSADGRD QFCWSAGGYT CLLTADMLGK DELVRMAESV
GV