| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1735 |
|---|
| Symbol | |
|---|
| ID | 4846904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1736293 |
|---|
| End bp | 1737162 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640116433 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_001047644 |
|---|
| Protein GI | 126179679 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTT ACCTTGACGG CAGATTCGTC CCGGAGGAGG AGGCGAAGGT TTCGGTCTTC
GACCACGGGC TTCTCTACGG CGACGGCGTT TTCGAGGGGA TACGGGCCTA CAACGGCAGG
GTCTTCCGTC TCGACGAGCA CATCGCACGG CTCTACGACT CGGCGAAGGC AATCGACCTT
GCCGTCCCGA TCACGAGGGA GGAGATGGCC GAGGCGATCA AGGAGACGCT CCGGAAGAAC
AACTTGAAGG ACGCCTACAT CCGCCCGATC GTGACGAGGG GCGTCGGCGA CCTCGGTCTC
GACCCCCGGA AGTGCGAAAA GCCGACCGTC ATCGTCATCG CCGTCACCTG GGGCGCGATG
TACGGCGACC TCTACGAGAA GGGGCTCCGG GCGGTCTGCG TCTCGGTCCG CCGCACCCCG
CCGGAGTCGA TGCCGCCGAA CGTCAAGAGC CTGAACTACT TAAACAACAT CCTCGCGAAG
ATCGAGGCGA ACTACCGCGG CGTCGACGAG GCGATCTTCT TCGACACCAA GGGCTACATC
GCCGAGGGCT CGGGGGACAA CATCTTCGTC GTCAAGGACG GCGCCATCGT CACCCCGCCG
ACTTTAAACA ACCTGCGCGG CATCACCCGG GCGGTCGTCC TCGAGATCGC GGAGTCGATG
GGCATCACCC TCCTCGAGCG GAACCTCGGC TACTTCGACC TCTACACCGC CGACGAGGTC
TTCGTCACCG GAACCGCGGC GGAAGTCGGC CCGATCCGCG AGATCGACGG CCGCGTCATC
GGGAACGGCA AGCCCGGCCC CGTCACCCGG CAGCTGATGG CGGCCTTCAA GACCGTCACC
CAGAAGGAAG GAAGCCCGAT CGGCGAGTGA
|
|---|
| Protein sequence | MIIYLDGRFV PEEEAKVSVF DHGLLYGDGV FEGIRAYNGR VFRLDEHIAR LYDSAKAIDL
AVPITREEMA EAIKETLRKN NLKDAYIRPI VTRGVGDLGL DPRKCEKPTV IVIAVTWGAM
YGDLYEKGLR AVCVSVRRTP PESMPPNVKS LNYLNNILAK IEANYRGVDE AIFFDTKGYI
AEGSGDNIFV VKDGAIVTPP TLNNLRGITR AVVLEIAESM GITLLERNLG YFDLYTADEV
FVTGTAAEVG PIREIDGRVI GNGKPGPVTR QLMAAFKTVT QKEGSPIGE
|
|---|
| |