Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1720 |
Symbol | |
ID | 4846558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1720352 |
End bp | 1724131 |
Gene Length | 3780 bp |
Protein Length | 1259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640116418 |
Product | hypothetical protein |
Protein accession | YP_001047629 |
Protein GI | 126179664 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACGCT TCAACCTCAG CCCGTCGCTC ATCGGCCGGT TCTTCTACCA CGACTGCGAA CGCCACCTCC GCTACCACGC GACCCCGGAG CAGGAGCGCG CCGGAGCCGG CATCCCGGCG GCCGCGATCG ACACGAGCCC GGTGACGCGA GCCCTCCTCG ATGCCGGCAT CCGGTGGGAG GAGGAGGTGA TCCGGACGAA ACTCGCGGGC AGGGTCCGGC TCCCGGACGG GGCCGGGCCG ATTTCGGGGC GGTCGTTCTC CATCGAAGAG AGTTTTAACC TCTTCCCCGG GCTCTCGCCG GGTGAGGCAA TCTACCAGAC GACCATCCCG GTCTCGATCC ACTTCCTGAA GAGCTACGAT CTTGACCCCA GGATGCACCG GTTCTCCCCC TGCCGCCCGG ATCTCGTCAG GGTCGATGAA GAAGGTCGCC TGCAGATCAT CGACATCAAG GCAAGCGAAG AACTCAGCGT CAGCCACCGG ATCCAGGCGA CGCTGTATGC CCTGATCCTC GAGCACGCCC TGGACCTGCT CGGGCTCGAT CTCCGGGTCG ACCGGAACCG GGCGGGGATC TGGCTTTACG GGGAGGACGA ACCGGAACCC TTCGATCTAA ACCTCAACAT ACGGGTGATC GAGGACTTCT TCCGCCACCG CCTCCCGGGT ATCCTCACCG CCCCACCGGG GGACGTGCCC TGGCACCTCA CCTCGCGGTG CGAGTCCTGC GAGTTCTACC ACCATTGCCG CGCAGAGGCG GAAGATTCCT CCTCGGTCTC GCAGATCCCG GGGCTCTCGC CCATCGGGCG GCGCTACCTG CGGGAGGCGC CTTGGGACGG CGGGCTCTCG ATCAATGCGC TCTCCGACCT GGAGGCGTTC CTCCGTGACC CGGAGAGCGA CGGCTGCCTT GACAACTGCG GGTCGCTCGC CGGCCAGGGC GACCGCCTGC GGGCGACCGT CCGGGCACTC ACCACAGGGG AAGTCGTTTC GCTCGCCGCG ACCTCGCTCG CACTCCCCGT CTACGAGGAT ATCGCCGTCG TCCTGACGCT CCAGAAAGAC CCCGTATCCG GCCGGATATA CGCCCTCGGG TTCCGGCGGA GCAGAGGCAA AGCCGTCTAC GGGACGCCCT CGCACGAAGA AATCTTCGTC GCGGCGGATC CCGGCGACTG CACCCGGGTG CGCCGGGAGT TCGTCCGGGC GCTCGCCGCG GAACTCGAGG CCGTCGACGA ATACAACCGG GGCCGCGACT GGGCCGAACA GGAGTCGGTG CAGACCTACG TCTACGACAC CTACGAGGAG GAACTCTTCA CCCGGCTGCT CGAAGAGGCG CTCGACGACC CCGTGACCGC CGAGGACGCT CTCCGGTTGC GGTTCTACTA CCAGGATCCC GGCATCGCTC TCGGGTCGAG CCACCCGAGC ACGTCCGTCC CCTTCCCGGT CGTCGTCCTG ACACGGGAGA TCCGGCGACT GCTCGCGCTT CCCGTCCCGT TCACGCTCCG CCTGCCCGAG GTTCTCGCGG CAATCCCCTC CTCCCGGTTC GCGTACCGGC TCGACCCAAG CTCCCTCTTC TGGAACGAGC ACGGCAACGC CATGAAGAGC GACGCCATCA TCATGGCCTG GCACGGGAAA CGGCCGGAGG CTACGGACTG GATCCGGCAG GAGGTCTCGC GCCGCCTGCT CGCCGCGGGG AGCGTCCTCG ACGGACTCCG CGAACGAACG AAGGAGAGAC TCGTGCGGTG GGCGGAGAAG TTCCGGTTCC CGGGTTCGTG GGACGCCGCG ACGCCCGAGA TATCCCGCCT TCTCTTCATC GCGGAGTACG AGTCGACCAT GGGCGCCCGT CGGGTGCAGG AGCTGCGGAG CAGGCCGTGG GCTGCAAGGG TCCGTGACGG CATCAGCATC CCCCTCAAGA AGAGCGAGGG GAACTTCTGG AAGGTGCTCG CCCCCCTGGA TCTCTCGCTC TTTGAGCAGT CGCGGGCGTT CAGTCACCTC CTCGTGCCGG ACGGCGAGGC GGGCGAGGAG GCGGAACGGG CGTTCGACGA CCTCCGCTAC CGGAGCAGCC CAAACCCCGG GAACAGCGGG GTCTGCTTCG CAAGAGTCCG CGACACCATC GTCGACCGGA CGGCCGGGGA GGTCAGGGGG CTCGTGCTGG AGGTGACCCA CCCCCGCGAC CACGCACCCT TCTCCGAGGG CGATCTCGCG GTGCTGCACC CCCGGTTCAC GGACTTCACC GTCCCGCGCT ACGTCGACCG CCTCCTCGCC CTGGACGAGC AGCCGGAGAA CGCCTTCATC CGCCTCCTCC GCGACCCGCG GGGGTTCGCC GCACCGATCC CCGAGCCCGG AGAGGTCGTC ACCGACGCCG GACGGCTCGC CCGCGATGCC GGGTTCACGA GAAGCCAGAA TGCAGCGTTC TCCCACGTGA CGGAGAACCG CCTGACCCTG GTCTGGGGGC CGCCCGGGAC AGGGAAGACG CATTTCCTCG CGACGGCGAT CCTCTCGCTC GTCAAAGCCC GGCGGGCGCA CGGGGAGCGG ATCCGGGTGG GGGTTGCGGC GTTCACCCAC GCGGCCGTCG AGAACCTGCT CGTCAAGGTG CAGGCGTCGG TCGACGCGTT CGGCCTTACT GCAGGCCTTC CGATCTACAA ACTGAGGGAT ATCCGGACGG CCGGCGGGGA GCGGAGCCTC GAGGTGCTGC CCCACGACCG GGCCGAGACC GTCGTCGGCT ACCCGGCCCT CCTCCTCGGC GGGACGGTGC ACGGTTTCGC AAAACTCGAG AAGTCCCTCC CGTCCCTCGA TCTCCTGATC GTCGACGAAG CGTCGCAGAT GCGGGCGGCG GAACTCGCGA TGGTGCTCCC GATGCTCGGC CAGGGCGGAA GGCTCGTCCT CGCGGGAGAC GACCTCCAGC TCCCGCCGGT CGTCCAGGGG GCGTATCCGG CACCGGTTGA CGGTCTCCCC GGGCTCGAAG ACTCCGTCTT CGCCTACCTC CGGCACCGCG ACGACCCCGG CCGCCCCGTC TACACCTGCC AGCTCCAGGA GAACTGGCGG ATGAACCGCA CCCTCTCGCG GTTCCCGGCG GAGACGCTCT ACGGAACCGG GTACGCTTCC GCGACCGACG CGATCGCAGC GCAGCAGCTC GCCCTCGCCC CCGGTTCGCC ACTGGAGGAG TGGATGGAAT GGGTCCTCGA TCCGGCATAC CCGCTCGTGC TCTGCGTTCT CGAGGGCGTC CGGACGACCG TGGAGAACCG GGTCGAGGCG GCGCTGGCCG CCCGGCTGGC CGGGACACTC CGGGAGAGGC TCCTCGACCC CGGCTCGGGA GAACGTTACC CGGCGACGGA GGACGGAGAT TACCGCTTCT GGCGGCACGG GCTCTTCATC GTCAGTCCGC ACCACGCACA GATAGGCGCC ATCAAGAACA GTCTCGCCGG GGTGCGGGAC TGGAAGTATC CGCCGTTCGT GGACACCGTC GACAAGATGC AGGGGCAGGA GGCGGAGAGC GCGATCATCA GTTACGGCGT GAGCGACGTC GAGACCGCCC TTCGCGAGGC CGAGTTCATC TACAGCAGGA ACCGCCTGAA CGTATCGCTG ACCCGGAGCC GGGCGAAGTG CGTGGTCTTC CTGCCCCGGC CGCTCCTTGA GCCGCCGCTT GATCTGGTGC AGAACGAGAA GGCGGCGGAG GGGCTCCGGC AGATGCTCGA CCTCCAGGAG TTCTGCCGGG CGCACGGCGA TACGCGGACA TTCGACCTCG ACGGCGAGGA GGGCGTCCGG CTCACGGTGA TGCGGGCGCG GGTGGAGTGA
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Protein sequence | MPRFNLSPSL IGRFFYHDCE RHLRYHATPE QERAGAGIPA AAIDTSPVTR ALLDAGIRWE EEVIRTKLAG RVRLPDGAGP ISGRSFSIEE SFNLFPGLSP GEAIYQTTIP VSIHFLKSYD LDPRMHRFSP CRPDLVRVDE EGRLQIIDIK ASEELSVSHR IQATLYALIL EHALDLLGLD LRVDRNRAGI WLYGEDEPEP FDLNLNIRVI EDFFRHRLPG ILTAPPGDVP WHLTSRCESC EFYHHCRAEA EDSSSVSQIP GLSPIGRRYL REAPWDGGLS INALSDLEAF LRDPESDGCL DNCGSLAGQG DRLRATVRAL TTGEVVSLAA TSLALPVYED IAVVLTLQKD PVSGRIYALG FRRSRGKAVY GTPSHEEIFV AADPGDCTRV RREFVRALAA ELEAVDEYNR GRDWAEQESV QTYVYDTYEE ELFTRLLEEA LDDPVTAEDA LRLRFYYQDP GIALGSSHPS TSVPFPVVVL TREIRRLLAL PVPFTLRLPE VLAAIPSSRF AYRLDPSSLF WNEHGNAMKS DAIIMAWHGK RPEATDWIRQ EVSRRLLAAG SVLDGLRERT KERLVRWAEK FRFPGSWDAA TPEISRLLFI AEYESTMGAR RVQELRSRPW AARVRDGISI PLKKSEGNFW KVLAPLDLSL FEQSRAFSHL LVPDGEAGEE AERAFDDLRY RSSPNPGNSG VCFARVRDTI VDRTAGEVRG LVLEVTHPRD HAPFSEGDLA VLHPRFTDFT VPRYVDRLLA LDEQPENAFI RLLRDPRGFA APIPEPGEVV TDAGRLARDA GFTRSQNAAF SHVTENRLTL VWGPPGTGKT HFLATAILSL VKARRAHGER IRVGVAAFTH AAVENLLVKV QASVDAFGLT AGLPIYKLRD IRTAGGERSL EVLPHDRAET VVGYPALLLG GTVHGFAKLE KSLPSLDLLI VDEASQMRAA ELAMVLPMLG QGGRLVLAGD DLQLPPVVQG AYPAPVDGLP GLEDSVFAYL RHRDDPGRPV YTCQLQENWR MNRTLSRFPA ETLYGTGYAS ATDAIAAQQL ALAPGSPLEE WMEWVLDPAY PLVLCVLEGV RTTVENRVEA ALAARLAGTL RERLLDPGSG ERYPATEDGD YRFWRHGLFI VSPHHAQIGA IKNSLAGVRD WKYPPFVDTV DKMQGQEAES AIISYGVSDV ETALREAEFI YSRNRLNVSL TRSRAKCVVF LPRPLLEPPL DLVQNEKAAE GLRQMLDLQE FCRAHGDTRT FDLDGEEGVR LTVMRARVE
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