| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1708 |
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| Symbol | |
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| ID | 4847131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1708849 |
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| End bp | 1710261 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116406 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001047617 |
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| Protein GI | 126179652 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACAA GTGACTCGGA AGACGATACA CCCGCAAGTA GTAACCAAAC AGAAGGAACA
AAGATACTCC TCGCCGATCC GAAGACCGCG ATCCTCCGGC TCTCCCTGCC GATGATGATC
GCGATGACCC TCATGACCCT CTACAACGTC GTCGACGCGT TCTGGGTCGC GGGTCTCGGT
GCAGACGCTC TTGCCGCTGT CGGGTTCGCA TTCCCGCTCT TCATCATAAC CATCGGGTTA
GCGAGCGGCC TTGGAACCGG CGGGGAAGCG GCGCTCGCGC GGACGATCGG TGCTCGCGAC
AGGGCCGGTG CGAGCAGTGT TGCGATGCAC ACCCTTCTCC TGATGACCGT GCTCGCCGTC
GCCGTCACCA TCCCGCTCTA CCTCTTTGCC CACGATATCT TCGTCCTCAT GGGAGCGGGC
GACGCCGTCG GTCTAGCCAC CGAGTATGCG CGAATCCTCT TTATGGGGAC GTTTGCCCTC
CTCTTCGGCG AGGTCGCCTA CGCGCTCATG CACGGTGAAG GAGATGCAAA GCGGACGATG
TACGCCATGG CGGCGGGAGC GGTGGCGAAC ATCGCCCTCG ACCCGATCCT GATCTACGGG
CTCGATATGG GGATCGGCGG CGCAGCGTGG GCGACCATCC TCGCGGAGGT CATCGCCGCC
GTCCCGATGG TCTACTGGCT CTTCGTGAAG AGAGATACCT ACATCTCGCT CCGCTTCCGG
GAGTTCTCCC CGGACGCTGC AGTCGCACGG AACGTCCTGG GGGTTGGTCT CCCCGCCGCA
GCCGAGCAAC TGGCACTCGC CCTGATGGCC CTGATCTTAA ACGGCGTCAT CGTCCTCATA
GCGAGCACCG ACGGCGTCGC CGTATACTCG GTCGGGTGGC GGGTCGTGAG CATCGGTCTG
ACGCCGATCC TCGCCATATC CTCGGCGGTG GTCGCGGTCA CTGGCGCCAC CTACGGGGCA
CGGGCGTACG CACGGATGGA GACCGCACTC CGGTTCGCCG CACGGCTTGG TCTCGGGATC
GGTCTCGGGC TTGCCGTGGC CACGTTCGCC TTCGCCCCCC GGATTGCCGC ACTCTTCACG
GCGGGCGACA CCGCCGGGAT TGCTCCCGAG CTGACGACCT ACCTCCAGGT CATGAGTCTC
GTCTACCCCA TGGTCGGGTT CGGGCTCTTC TCGGCGTCGT TCTTCCAGGG GACGGGGCTT
GGCGCACGGT CTCTAACGAT CACGGTTCTG CAGAACGTCG TCCTGTCCAT CCTCTTCGCC
TGGATATTTG CAGCCGGTCT CGGGCTCGGC CTCTCCGGCA TCTGGTGGGG AGTTGCCGCA
GGGAACGCGA TCGGCGCGGC GCTCGGGTAT GCCTGGGCGC GCCGGTACTC GGCAGGGCTC
CAGATCAGGC AGGCCGGAGC GACGGCGGCG TGA
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| Protein sequence | MPTSDSEDDT PASSNQTEGT KILLADPKTA ILRLSLPMMI AMTLMTLYNV VDAFWVAGLG
ADALAAVGFA FPLFIITIGL ASGLGTGGEA ALARTIGARD RAGASSVAMH TLLLMTVLAV
AVTIPLYLFA HDIFVLMGAG DAVGLATEYA RILFMGTFAL LFGEVAYALM HGEGDAKRTM
YAMAAGAVAN IALDPILIYG LDMGIGGAAW ATILAEVIAA VPMVYWLFVK RDTYISLRFR
EFSPDAAVAR NVLGVGLPAA AEQLALALMA LILNGVIVLI ASTDGVAVYS VGWRVVSIGL
TPILAISSAV VAVTGATYGA RAYARMETAL RFAARLGLGI GLGLAVATFA FAPRIAALFT
AGDTAGIAPE LTTYLQVMSL VYPMVGFGLF SASFFQGTGL GARSLTITVL QNVVLSILFA
WIFAAGLGLG LSGIWWGVAA GNAIGAALGY AWARRYSAGL QIRQAGATAA
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