Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1707 |
Symbol | |
ID | 4846681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1707235 |
End bp | 1708842 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116405 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_001047616 |
Protein GI | 126179651 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.366818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAG CGGATTCGAT ATCAACCATA TCTCAAGAGG CGTTTCGGAT TCTCGACGAG CCCGGCGCAG GTATTCTCGT GCTCGATCGG AAGATGCAGG TGTTCTGGGC AAATGCATTT GCCATGGATA TTCTCTGTGC ACGCGAAGAG GAGATCCTCG GATTCGACGC CCGCCGGATC CTCGACGCAC GTCTGGCGCC GCTTCTGCAG GAGAGGGACG TTGCCAGGAG ACTCCTCGCC ACGATGAACA ACGGAACCGA GATGTCCGGT CTCGACCTCT CGGTGCAGGA CTCACGGGGG GAAGAGCGAC GGATCGTCTA CTCCAGCCGA AAGATTGAGC AGGGGACGTT CGCAGGGATG TGGGTGCTCT GCATGCGGGA CGTCACCGAC CGGAGGCCGG CAAACGAAGG GCTGCTCTCT TCGAACAGAC AACTCCTGGT CCTGAACCAG ATCATGGGAG TATCCGCGTC GTCCCTCTCG CTGGACGAAC TGCTCGAAGC GTCGCTCTCG AAGACCCTCG ATCTGCTCGG GTTCGACCTG GGGCTGACCT ACCTCTTGAA CCCGGAGCGG ACGATAGCGC TCACGCGCTA CCACCGCGGC GTCCCGGAGA ACTACCTCGC CCGGAACAGG GCCATCAAAG TTCACCACTG GCCCTGGAAC TTTGTATTTG TCGCCGGACA GCCGCGTTAC CTCGATCTGC AGGGGGAAGG GGGCACGATC GAGGAGGAGA TCCTCGCCTC GCTCGGGATT TCCACCCTCG CCTGCATCCC GATCCTTGCG GAATCGGTCG TGGTCGGCGC GCTCTTCCTC GGGAGCAGGA AGGCCGAGGG GTTCCGGGAC GAGGAGCGCC GCCTCCTCGA GGCGATCGGG CAGGAGATCG GTTCGGGTGT TCTGCGGAGC ATGCTCCACA AGCGGCTGGA GGCGGCCCAC CGCGAGACGA ACCTCTACCT GGACGTCATG ACCCACGACA TCAAGAACGC GGAGAACGTC GCGAACCTCT ACTGCGACCT CCTGCTCGAT ATTCTGGAGG GCGACGCCGC CCAGTATGCA CGGAAACTCA AGGGAAGTAT CCGCAAAAGC AGCGGCATCC TCCAGAACGT CTCGACCATC CGGCGCATTC ACCAGGAACC GCCCGACGTA AAACCGGTCC ATCTCGGCCG CGTGATCCGG GCGGGGATCG AGCGCACCCC GGAAGCAGCC ATCTCTTTTG ACGGCACCAC GGCGGAGGTC TGGGCCGACG ACCTGCTCCC CGAGGTCTTT ACGAACCTCA TCGGCAACGC CGTGAAGTTC GGCGGACCGG ACGCCGGGAT CGCGATCCGC GTGGAGGACT GCCTCGAGGA GGACCACGCG GTGGTGGTGA CCGTGGAGGA CACCGGCCCC GGCATCCCCG ACGAGATGAA GGAGACGATC TTCGACCGGT TCAGGCATGG CAGGAGCCGG GGATGCGGGG AAGGGCTCGG CCTCTACATC GTCGGGATGC TTGTCGAGCG CTACGGCGGC CGGATCTGGG TCGAGGACAG GGTGGAAAGC AGGCCCGACC TCGGGGCGTC GTTTAAGTTC ACATTGCGCG AAGTGGTGCA CGGCGAGGCC GGCGAGTATG AGGAGTGA
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Protein sequence | MNRADSISTI SQEAFRILDE PGAGILVLDR KMQVFWANAF AMDILCAREE EILGFDARRI LDARLAPLLQ ERDVARRLLA TMNNGTEMSG LDLSVQDSRG EERRIVYSSR KIEQGTFAGM WVLCMRDVTD RRPANEGLLS SNRQLLVLNQ IMGVSASSLS LDELLEASLS KTLDLLGFDL GLTYLLNPER TIALTRYHRG VPENYLARNR AIKVHHWPWN FVFVAGQPRY LDLQGEGGTI EEEILASLGI STLACIPILA ESVVVGALFL GSRKAEGFRD EERRLLEAIG QEIGSGVLRS MLHKRLEAAH RETNLYLDVM THDIKNAENV ANLYCDLLLD ILEGDAAQYA RKLKGSIRKS SGILQNVSTI RRIHQEPPDV KPVHLGRVIR AGIERTPEAA ISFDGTTAEV WADDLLPEVF TNLIGNAVKF GGPDAGIAIR VEDCLEEDHA VVVTVEDTGP GIPDEMKETI FDRFRHGRSR GCGEGLGLYI VGMLVERYGG RIWVEDRVES RPDLGASFKF TLREVVHGEA GEYEE
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