Gene Memar_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1704 
Symbol 
ID4847523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1702704 
End bp1704248 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content63% 
IMG OID640116402 
Productglycosyl transferase family protein 
Protein accessionYP_001047613 
Protein GI126179648 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACGG CAGCACACAT TTCATTCTTT ACCGCCACGC TCATGGTGCT GCTCGCGGCC 
GTCTTCCTCC GTGACCTGCA CCTCATACTG ACCGGAGCCG GGTGGAGCCT GTTTGCGAGG
ATTCTCTCGC TCTTTCTCGT CGCCGTCACG GCATTCGGGG TGATCCAGTT CGTGAGCTAT
GCCGATCACC TCCTCCGGTC GATCTATGCC TACCGTCCCA CGGCACCGCA GGGGTCGGGT
GCCCCGACCT CTCCCGTCGC GGTCTTCATC CCGGTCTACA ACGAGGAGCC GGACGTGGTC
GAATTCTGTG TCCGGGCGTG CGCGGCTATC GCCTACCCCG ACCTCCGTAT CTTCCTCCTC
GACGACTCCA CGGATACGCG GAAACGCACG GCGATGCAGG GGATATGCAG GAGGTACGGT
CTCCGTTATC TCCACCGCGA CCACAGGCGC GGGTTCAAGG CGGGAGCGAT CAATCACGCC
CTCTCGCATC TCGGCGGCGA TACGCCGTAC CTCCTGGTCA TCGACGCCGA CCAGAGAGTG
AAACCGGAGA TCCTTGCTGA TCTCGTCCCC ATCCTCGAGG CCGACCCGGC CGTATCCTTC
ATCCAGACCC CGCAGTTCTT CCGTTCGGAG CCCCACGACC CGATAAGCGT CACATTCTCC
TACCAGCAGC ACATCTACAA CAAGCACGTC TGCAGGGGGC TCTCCGTCAA CAATACCGCC
ATGCTGACGG GTTCGAACTG CATCTTCCGG GTGAGCCATC TCGCCGCCAT CGGAGGGATG
GACGAGGCGT GCATCGCCGA AGACATCGCC ACTTCGTTTA CGTTCCACCT CAAGGGCCGG
CGGGGGGTCT TTCTCGATGC CGTGTATGCG GAGGGCGTCG GGCCGCCGAA CCTCGCCGCA
TACTTCACGC AGCAACTCCG CTGGGCATAC GGGAACACCC AGCTTCTCGG GACGATTCTC
CGGCAGCTCG TGGCGCAGCC CCGGAGCATG ACCGCGACGC ACTGGCTTGA GTTCCTCGTC
ACGGTCTCGA TCTACCTGCT CGGAGGGGTG AACGTGGTGC TCTTCCTCCT TCCCGTCGCC
ACGCTGATCT TCGGTATTCC GATCCTCCCC GTATGGGTTC CCCCGACGTT CGCCGTGGTG
CTCGTCGTGG TGATCGCGAT CCAGGTCATC GTCAGCGTTC GTGAGCGGCA GTACTCCCTG
TACGACCTCG CGTTCTCGCA GGCGATCTTC AATACGCTCG CCTTCGTATA CGCCCGGGCA
ATCTGGTACG CCGTCTCCGG AAGGCACCTG CCGTTCGTCG TGACGCCGAA GGTTGCGCCT
GGCCCCTCTT CCCGTTCCCG TGTCCGGATA GCCCCGGTTC TCCTCGTGAT CGCGGCCGTC
CTGGTGTCGA TGGCCGTCGG CATCATGCGG ACGGTCTCCC TGGGTTCGGA TGCCGGCACG
GCGATCCCGC TCTTCTGGGC CTGCTACACG CTCGCCGTCC TCTCGTCGTT TCTGGTGGTC
TGGCAAAGAG ACGGCAGGCT TGTGGCGGGA GGCGGTATCG ACTGA
 
Protein sequence
MTTAAHISFF TATLMVLLAA VFLRDLHLIL TGAGWSLFAR ILSLFLVAVT AFGVIQFVSY 
ADHLLRSIYA YRPTAPQGSG APTSPVAVFI PVYNEEPDVV EFCVRACAAI AYPDLRIFLL
DDSTDTRKRT AMQGICRRYG LRYLHRDHRR GFKAGAINHA LSHLGGDTPY LLVIDADQRV
KPEILADLVP ILEADPAVSF IQTPQFFRSE PHDPISVTFS YQQHIYNKHV CRGLSVNNTA
MLTGSNCIFR VSHLAAIGGM DEACIAEDIA TSFTFHLKGR RGVFLDAVYA EGVGPPNLAA
YFTQQLRWAY GNTQLLGTIL RQLVAQPRSM TATHWLEFLV TVSIYLLGGV NVVLFLLPVA
TLIFGIPILP VWVPPTFAVV LVVVIAIQVI VSVRERQYSL YDLAFSQAIF NTLAFVYARA
IWYAVSGRHL PFVVTPKVAP GPSSRSRVRI APVLLVIAAV LVSMAVGIMR TVSLGSDAGT
AIPLFWACYT LAVLSSFLVV WQRDGRLVAG GGID