Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1704 |
Symbol | |
ID | 4847523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1702704 |
End bp | 1704248 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640116402 |
Product | glycosyl transferase family protein |
Protein accession | YP_001047613 |
Protein GI | 126179648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAACGG CAGCACACAT TTCATTCTTT ACCGCCACGC TCATGGTGCT GCTCGCGGCC GTCTTCCTCC GTGACCTGCA CCTCATACTG ACCGGAGCCG GGTGGAGCCT GTTTGCGAGG ATTCTCTCGC TCTTTCTCGT CGCCGTCACG GCATTCGGGG TGATCCAGTT CGTGAGCTAT GCCGATCACC TCCTCCGGTC GATCTATGCC TACCGTCCCA CGGCACCGCA GGGGTCGGGT GCCCCGACCT CTCCCGTCGC GGTCTTCATC CCGGTCTACA ACGAGGAGCC GGACGTGGTC GAATTCTGTG TCCGGGCGTG CGCGGCTATC GCCTACCCCG ACCTCCGTAT CTTCCTCCTC GACGACTCCA CGGATACGCG GAAACGCACG GCGATGCAGG GGATATGCAG GAGGTACGGT CTCCGTTATC TCCACCGCGA CCACAGGCGC GGGTTCAAGG CGGGAGCGAT CAATCACGCC CTCTCGCATC TCGGCGGCGA TACGCCGTAC CTCCTGGTCA TCGACGCCGA CCAGAGAGTG AAACCGGAGA TCCTTGCTGA TCTCGTCCCC ATCCTCGAGG CCGACCCGGC CGTATCCTTC ATCCAGACCC CGCAGTTCTT CCGTTCGGAG CCCCACGACC CGATAAGCGT CACATTCTCC TACCAGCAGC ACATCTACAA CAAGCACGTC TGCAGGGGGC TCTCCGTCAA CAATACCGCC ATGCTGACGG GTTCGAACTG CATCTTCCGG GTGAGCCATC TCGCCGCCAT CGGAGGGATG GACGAGGCGT GCATCGCCGA AGACATCGCC ACTTCGTTTA CGTTCCACCT CAAGGGCCGG CGGGGGGTCT TTCTCGATGC CGTGTATGCG GAGGGCGTCG GGCCGCCGAA CCTCGCCGCA TACTTCACGC AGCAACTCCG CTGGGCATAC GGGAACACCC AGCTTCTCGG GACGATTCTC CGGCAGCTCG TGGCGCAGCC CCGGAGCATG ACCGCGACGC ACTGGCTTGA GTTCCTCGTC ACGGTCTCGA TCTACCTGCT CGGAGGGGTG AACGTGGTGC TCTTCCTCCT TCCCGTCGCC ACGCTGATCT TCGGTATTCC GATCCTCCCC GTATGGGTTC CCCCGACGTT CGCCGTGGTG CTCGTCGTGG TGATCGCGAT CCAGGTCATC GTCAGCGTTC GTGAGCGGCA GTACTCCCTG TACGACCTCG CGTTCTCGCA GGCGATCTTC AATACGCTCG CCTTCGTATA CGCCCGGGCA ATCTGGTACG CCGTCTCCGG AAGGCACCTG CCGTTCGTCG TGACGCCGAA GGTTGCGCCT GGCCCCTCTT CCCGTTCCCG TGTCCGGATA GCCCCGGTTC TCCTCGTGAT CGCGGCCGTC CTGGTGTCGA TGGCCGTCGG CATCATGCGG ACGGTCTCCC TGGGTTCGGA TGCCGGCACG GCGATCCCGC TCTTCTGGGC CTGCTACACG CTCGCCGTCC TCTCGTCGTT TCTGGTGGTC TGGCAAAGAG ACGGCAGGCT TGTGGCGGGA GGCGGTATCG ACTGA
|
Protein sequence | MTTAAHISFF TATLMVLLAA VFLRDLHLIL TGAGWSLFAR ILSLFLVAVT AFGVIQFVSY ADHLLRSIYA YRPTAPQGSG APTSPVAVFI PVYNEEPDVV EFCVRACAAI AYPDLRIFLL DDSTDTRKRT AMQGICRRYG LRYLHRDHRR GFKAGAINHA LSHLGGDTPY LLVIDADQRV KPEILADLVP ILEADPAVSF IQTPQFFRSE PHDPISVTFS YQQHIYNKHV CRGLSVNNTA MLTGSNCIFR VSHLAAIGGM DEACIAEDIA TSFTFHLKGR RGVFLDAVYA EGVGPPNLAA YFTQQLRWAY GNTQLLGTIL RQLVAQPRSM TATHWLEFLV TVSIYLLGGV NVVLFLLPVA TLIFGIPILP VWVPPTFAVV LVVVIAIQVI VSVRERQYSL YDLAFSQAIF NTLAFVYARA IWYAVSGRHL PFVVTPKVAP GPSSRSRVRI APVLLVIAAV LVSMAVGIMR TVSLGSDAGT AIPLFWACYT LAVLSSFLVV WQRDGRLVAG GGID
|
| |