Gene Memar_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1669 
Symbol 
ID4846173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1673114 
End bp1673635 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content67% 
IMG OID640116363 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_001047578 
Protein GI126179613 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGA GTATACCTCC TGAACCGGGA GACGATCGTT CGAATAGCCG GGACCTGCAG 
GTTCTCATCG CAAGGCTCTC GAACCCGAAC AAGACGGTGC GGGCGGAAGC GATGCACGGG
CTCGTGGCGA TTGGAAAACA TGCCGTGCCC GCCTGCATCG CCCTGCTATC GGACGGCGAC
TGGAGGGTGC GCTATCGTGC GGCGGAGGCC CTCGGGCTGC TCGCCGACGG CGAGGCGTAT
GCGGCCCTCG TCGCCGCCCT CGACGATGAA AAGGATCACG TCCGCTACAT GGCGGCGAAA
GGGCTCGGGC TGCTCGGCGA TCCCCGGGCG GTCGAGCGGC TCGGGCCGAT GCGAAACGAC
GAGAACGAGT TCGTCCGACG GAGCGTCGCC CGATCGCTCG GGACGATCGG CGGCGAGGAG
GCGGTTCTGG CGCTGCGTGC CGCCCTGGAG GGTGAGGCGA CCGACGGCGT CCGTGCGGCA
ATCCTTGAAG CGCTCCGCGA TATAGGGAAT GACGGGCCGT AG
 
Protein sequence
MTQSIPPEPG DDRSNSRDLQ VLIARLSNPN KTVRAEAMHG LVAIGKHAVP ACIALLSDGD 
WRVRYRAAEA LGLLADGEAY AALVAALDDE KDHVRYMAAK GLGLLGDPRA VERLGPMRND
ENEFVRRSVA RSLGTIGGEE AVLALRAALE GEATDGVRAA ILEALRDIGN DGP