Gene Memar_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1632 
Symbol 
ID4847522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1644599 
End bp1645825 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID640116326 
Producthypothetical protein 
Protein accessionYP_001047543 
Protein GI126179578 
COG category[C] Energy production and conversion 
COG ID[COG1625] Fe-S oxidoreductase, related to NifB/MoaA family 
TIGRFAM ID[TIGR03278] putative methanogenesis marker protein 10 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATC TCACCGTCGA TCTCGGAGGC CGGCCCGGTC TCGACTGCCG GGGATTCTGT 
TCGTACTGCT ACTTCAAACA CGTCAAAGGA ACGACGGCGT TCGGCTGCAG ATACTGCCTC
CCCTTCCAGA AGGGCTGCGA CTACTGCACC CGGGGGGTGC GGGAAGGGTA TGAGGCGTTC
AAGAGCCTCC GGACGGTCGC CGACGAGACG CTCGCAAACC TCCAGGTGAT GAGCGAGGAC
GTCGACCGGA TCACCATCAG CGGCGGCGGC GACCCGAGCT GCTACCCGGA GTTCGCCGAC
CTCGTCGAAC TGCTCGGCAG CATGGAGGTG CCGCTCCATA TCGGCTACAC CAGTGGGAAG
GGGTTCGACG ACCCTGCCAT CGCCGACCAC CTCATCGAGA ACGGCCTTGC CGAGGTCTCC
TACACGGTCT TCGCCGCCGA CCCCGAACTC CGGCGGCAGT GGATGCACGA CCCGACGCCG
GAAGCCTCGC TCGCGGTCCT CGACCGGCTC TGCGGCGCAA TCGACGTCTA CGCCGCAACA
GTCGTTCTTC CCGGCGTCAA CGACGGCAAA GCTCTCGAAG ATACCTGCGC CTGGCTGGAG
GAGCGCGGCG CAAAAGGGCT GATCCTGATG CGGTTCGCGA ACCGGACCGA CCAGGGGCTC
ATCCTCGGCA ACGCGCCCAT CCTCGAGGGG CAGCGGGTTC ACGCCGTCGA CGAGTTCCAC
GAGATGGTGA CGGACTTGAA CGACCGGTTC TCGATGAAGA TCAGCGGGAC GCCGCTCGGC
GACCCCTCGA TCGGCTCGCC GTTCGCAATC CTCCACGAGC CCGACCTCCT CAAAAAACTC
CCCCGCGTCC GGAAGCGTGC AACGGTGATC ACCGGGAGCA TCGCGGCCCC ATTCCTCCAG
CGGCTCCTCT CGATCCGCGG CTCGACCTCG AGGGTCGTCG CGGTCAAAAA GGAGATCGCC
TGCCTCATCA CCGCCGACGA CCTCGCCGGG GTGAACCTAT CGAAACTCGA AGACGTCGTA
ATCCTCCCCG GCAGGGCGTT CGTCCACGAT GCCGAGGCTC AAAAGATCCT CTCCGCCGAC
GGCGTCGACC GCGAGGTGGT GCGCGGCCCC GAGTCGTTGA CCGCCGACGC GGAGACGAGC
ATGGGCATGA CCCGGATGGA AGTCCTCGAT AAAGAGATGG AAGGGTTCGC GGCCCTGATC
AACACGATCA ACCGCTACGG GCTCTGA
 
Protein sequence
MSHLTVDLGG RPGLDCRGFC SYCYFKHVKG TTAFGCRYCL PFQKGCDYCT RGVREGYEAF 
KSLRTVADET LANLQVMSED VDRITISGGG DPSCYPEFAD LVELLGSMEV PLHIGYTSGK
GFDDPAIADH LIENGLAEVS YTVFAADPEL RRQWMHDPTP EASLAVLDRL CGAIDVYAAT
VVLPGVNDGK ALEDTCAWLE ERGAKGLILM RFANRTDQGL ILGNAPILEG QRVHAVDEFH
EMVTDLNDRF SMKISGTPLG DPSIGSPFAI LHEPDLLKKL PRVRKRATVI TGSIAAPFLQ
RLLSIRGSTS RVVAVKKEIA CLITADDLAG VNLSKLEDVV ILPGRAFVHD AEAQKILSAD
GVDREVVRGP ESLTADAETS MGMTRMEVLD KEMEGFAALI NTINRYGL