Gene Memar_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1577 
Symbol 
ID4847317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1581903 
End bp1583072 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content64% 
IMG OID640116270 
Producttranslation-associated GTPase 
Protein accessionYP_001047488 
Protein GI126179523 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACAC TGGCCATTGC AGGAAAACCA AACTGTGGGA AATCAACGTT TTTCAGGGCG 
GCAACCCTCG CCCAGGCAGA GATCGCCAAT TACCCGTTCA CGACCATCGA CGCAAACCAC
GGCGTCGCGT ACGTCCGGAC AGCCTGCCCG TGCCAGGAGA TGCATGTTCC GTGCGAAAAC
TGCCGGGACG GGGTCAGGTT CATCCCGGTC GGGCTGATCG ATGTGGCGGG CCTCGTCCCC
GAGGCGCACC TGGGGAGGGG GCTTGGGAAC CAGTTCCTCG ACAACCTCCG GCAGGCGGAC
GCTATCCTCC AGGTCGTCGA TGCCAGCGGG GCGACGGACG CCGAAGGGAA CCCGGTCGAT
ATCGGCTCGC GCGACCCGGT GAAGGATATC GAGTTCCTCC AGTACGAGAT GTCGATGTGG
ATGTACGGCA TCCTCTCGCG GAACTGGGCG AAACTCGTGC GGCAGGCCCA GGCAAAGGAG
TTCTCTCTCG CGGCGGCGAT CGCCGAGGTC TTTGCCGGCC TCGGAATAAC CTACGAGCAC
GTCCGCGACG CCACCGGGGC GGTCGGGATC GAGCTCCGGA CCGCCGGGGA GGAGGACCTG
ATCCGGTTCT GCCGCGAGCT GATGGCGATC AGCAAGCCGA TGCTGATCGT CGGGAACAAG
GCCGACCAGG CGCCGAAGGA GTGCCTTGAG CGGCTCGCGA ATCACGACGT CGTCTTTGCA
AGCGCCGCAG GCGAACTTGC GATCCGGATG GCCGCAGAGG GGAAGTTCGT CAGCTACCTC
CCCGGTGATG GGAGTTTCAC CGAGAACCCC GGGGCGAACC TCAGCGCCGC GCAGCGTGCC
GGACTCGCGA AGGTCGCGGA CTTCATGGAG ACATTCGGCG GCACCGGGGT TCAGAAGGCG
CTGGACGCCG CGGTCTTCAA CCTCCTCGAC CGGATCGTCG TCTTCCCGGT CGAGGACGAG
CACAAACTCA CCGACGGCAA GGGGAGGGTT CTCCCCGACG CGTTCCTCAT GAAACGCGGC
TCGACCCCCC GCGACCTCGC CTTCCAGGTT CACACCGATA TCGGCGAGGG GTTCCTGTAT
GCCATCGACG CGAAGATCGG GATGCGGATC AAGGACACAC AGGAACTGAA GAACGGCGAC
ATCATCAAGA TCGTCAGCGT CCGGAAGTGA
 
Protein sequence
MITLAIAGKP NCGKSTFFRA ATLAQAEIAN YPFTTIDANH GVAYVRTACP CQEMHVPCEN 
CRDGVRFIPV GLIDVAGLVP EAHLGRGLGN QFLDNLRQAD AILQVVDASG ATDAEGNPVD
IGSRDPVKDI EFLQYEMSMW MYGILSRNWA KLVRQAQAKE FSLAAAIAEV FAGLGITYEH
VRDATGAVGI ELRTAGEEDL IRFCRELMAI SKPMLIVGNK ADQAPKECLE RLANHDVVFA
SAAGELAIRM AAEGKFVSYL PGDGSFTENP GANLSAAQRA GLAKVADFME TFGGTGVQKA
LDAAVFNLLD RIVVFPVEDE HKLTDGKGRV LPDAFLMKRG STPRDLAFQV HTDIGEGFLY
AIDAKIGMRI KDTQELKNGD IIKIVSVRK