Gene Memar_1571 details

Gene Information

• Locus tag: Memar_1571
• Symbol: tmk
• ID: 4847502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1575057
• End bp: 1575674
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640116264
• Product: thymidylate kinase
• Protein accession: YP_001047482
• Protein GI: 126179517
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGATCA CCATCGAAGG GATCGACGGG AGCGGGAAGA GCACGCTTCT TGCCCGTCTC 
CGGGAACTGC TCGCCGACCT CGATCCGCTC TTCACCCGCG AGCCCGGCGC CACCTGGGTC 
GGCGAGTCGG TAAGGCGGGC GATTGCCGAA CGTATGGACC CGATCACCGA GGCGCTCCTC 
TTCTGCGCCG ACCACGCCGC GCACATCGAT ACGGTGATCC GGCCCGCCCT CGACGAGGGA 
AGGCTTGTCA TCTCCGACCG CTACGCCGAC TCGCGGTTCG CCTACCAGCC GGTCGTCCTC 
GACGGCGTCC TCCCCGACCC GCTCTCCTGG CTTCGCCGGA TCCACGAAGG ATGGTCGATC 
CGGCCCGACC GGACGTTTCT CCTGGTCCTG CCGGTCGAAG ACGCCGTCTC ACGACTTGGC 
CCTGAGAAAA AGAGAGAATA CTTCGAGAAC GCCGCGATCC TCGAGCAGGT GCAGGAGAAC 
TACCTGAACC TTGCAGCCGC CGACCCGTTA CGGTTCGTCG TCGTCGATGC GCTGCTCCCA 
AAAGAAGAAG TTGCCCGGTT CATCGCGGGC GAAATCAGGG CTGGTGCCCG ATCGTCACGA 
CGACGTCCCC GAGCGTGA 

 

Protein sequence

MLITIEGIDG SGKSTLLARL RELLADLDPL FTREPGATWV GESVRRAIAE RMDPITEALL 
FCADHAAHID TVIRPALDEG RLVISDRYAD SRFAYQPVVL DGVLPDPLSW LRRIHEGWSI 
RPDRTFLLVL PVEDAVSRLG PEKKREYFEN AAILEQVQEN YLNLAAADPL RFVVVDALLP 
KEEVARFIAG EIRAGARSSR RRPRA