Gene Memar_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1569 
Symbol 
ID4848141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp1573649 
End bp1574338 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content57% 
IMG OID640116262 
Producthypothetical protein 
Protein accessionYP_001047480 
Protein GI126179515 
COG category[S] Function unknown 
COG ID[COG1891] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.862522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAC TCGTCAGTCC AAGCAGCATT GAGGAGGCAA AAAGCTCGCT TTCCGCTGAC 
ATCATCGACG TAAAGAAACC CTCTGAGGGG TCGCTGGGCG CGAATTTTCC CTGGATCATC 
CGGGGGATCA AGGAGATCGC CGGCAAGAAG CCTGTCAGCG CTGCAATCGG GGACAATGAG 
TATAAACCGG GAACCGCAGC TCTTTCTGCA TACGGCGCCG CGCATGCAGG TGCCGATTAT 
ATCAAAGTCG GCCTGATGTT CGACGGAGAA GACCGTGCCC GCGAGGTCAT CGAGGCGGTG 
ACCACGGCGG TGAAGCACGA GTTTCCCGAG AAATACGTCG TCATTGCAGC GTATGCCGAT 
TTTGCAAGGA TGGGCACGAT CTCGCCGCTC GCGATCGGTT CTCTGGTCGC GGATGCCGGG 
GCCGACGTCG CCATGATCGA CACCGGTATT AAAGATGGGA AGAGTCTCTT TGAGTTCATG 
GACGAGGAGA CATTGATCCG GTTTGTCGGG CAGAACCAGG ATCTCGGGTT GCAGACGGCT 
CTTGCCGGGT CGCTGAAGTT CGAGGATCTC GATGCCTTAA AGCGGATCAA CCCCGAGATC 
ATCGGTGTCC GGGGGATGGT CTGCGGGGGC GATCGGTCGA CAACGGTCAG GGCGGAACTG 
GTGGAGAAAG CAATGTTGAT GCTCAGGTGA
 
Protein sequence
MQLLVSPSSI EEAKSSLSAD IIDVKKPSEG SLGANFPWII RGIKEIAGKK PVSAAIGDNE 
YKPGTAALSA YGAAHAGADY IKVGLMFDGE DRAREVIEAV TTAVKHEFPE KYVVIAAYAD 
FARMGTISPL AIGSLVADAG ADVAMIDTGI KDGKSLFEFM DEETLIRFVG QNQDLGLQTA 
LAGSLKFEDL DALKRINPEI IGVRGMVCGG DRSTTVRAEL VEKAMLMLR