Gene Memar_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1536 
Symbol 
ID4848094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1541506 
End bp1542363 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID640116229 
Producthypothetical protein 
Protein accessionYP_001047447 
Protein GI126179482 
COG category[S] Function unknown 
COG ID[COG4022] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR03275] putative methanogenesis marker protein 8 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0484595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC GTGACGAGCA TATCGTAGAG GCCGCCGGCA GATGCCTGGT CGTGATCCGG 
AACGGCCGGG TGGTCGAGGT CGGGACGCCG CAGATAGAGG ACTGCCCGCT GGCACGGCGG
TTCGCCTTCC CGGTCAAGGA GATGACGACG GAGGAGATAC GGAAGAATAT CGAGGAACGG
ATTCGATCGT TCGGGATGTG CACGCCGGAG CGCGAGGTCC TCGCCGGGCC GGACTTCGTT
CTCTTCGGGG CGTCGGAACT CCTGAGCAGC GCCGTCCGCC GGGGAGACCT CGACGCCGCG
GTGATCGCCT CCGACGGGGC GGGGACGCTT GTTGCGACGA ACCCCGCCCT CATCCAGGGA
ATCGGCGGCC GGATGTCGGG GCTCGTGAAG ACGAGCCCGA TCCGCGAGGT GATCGCGCGG
ATCGAGGAGA ACGGGGGCGT CGTCCTCGAT CCGGCAACCG CCGCGATCGA TCAGGCCGCC
GGCGTCGCCC TGGCGGCAGA ACTCGGCCAC CGCCGGATAG CCGTGACCAC CGCCGTTGCC
GCCGAAGCAG CGGCTATCCG GGAGCGTTTC CCCGGTGCCG TGATCGTCGC CGTCCATACG
ACCGGGATCT CACGGGAGGA CGCCGCGCTG ATGGCCCGGT CGGCTGATCT CCTCACCGCC
TGCGCCTCGC GTTACGTCCG GGAGGAGGCG GCGAAGACCG CGCTCCTGCA GGCGGGGACG
TCGATCCCGG TCTTCGCGAT GACGGCCGCA GGGAAGGCAG TCATCCTCGG GAAAGTCGCG
GAGACCGATC AGCAGGTCAT CGTCCACGGA GCGCGCCTCC CGGTGCCGGG ATCGCAATCG
CCCTCGCCGC TCCGCTGA
 
Protein sequence
MSDRDEHIVE AAGRCLVVIR NGRVVEVGTP QIEDCPLARR FAFPVKEMTT EEIRKNIEER 
IRSFGMCTPE REVLAGPDFV LFGASELLSS AVRRGDLDAA VIASDGAGTL VATNPALIQG
IGGRMSGLVK TSPIREVIAR IEENGGVVLD PATAAIDQAA GVALAAELGH RRIAVTTAVA
AEAAAIRERF PGAVIVAVHT TGISREDAAL MARSADLLTA CASRYVREEA AKTALLQAGT
SIPVFAMTAA GKAVILGKVA ETDQQVIVHG ARLPVPGSQS PSPLR