Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1536 |
Symbol | |
ID | 4848094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1541506 |
End bp | 1542363 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640116229 |
Product | hypothetical protein |
Protein accession | YP_001047447 |
Protein GI | 126179482 |
COG category | [S] Function unknown |
COG ID | [COG4022] Uncharacterized protein conserved in archaea |
TIGRFAM ID | [TIGR03275] putative methanogenesis marker protein 8 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0484595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACC GTGACGAGCA TATCGTAGAG GCCGCCGGCA GATGCCTGGT CGTGATCCGG AACGGCCGGG TGGTCGAGGT CGGGACGCCG CAGATAGAGG ACTGCCCGCT GGCACGGCGG TTCGCCTTCC CGGTCAAGGA GATGACGACG GAGGAGATAC GGAAGAATAT CGAGGAACGG ATTCGATCGT TCGGGATGTG CACGCCGGAG CGCGAGGTCC TCGCCGGGCC GGACTTCGTT CTCTTCGGGG CGTCGGAACT CCTGAGCAGC GCCGTCCGCC GGGGAGACCT CGACGCCGCG GTGATCGCCT CCGACGGGGC GGGGACGCTT GTTGCGACGA ACCCCGCCCT CATCCAGGGA ATCGGCGGCC GGATGTCGGG GCTCGTGAAG ACGAGCCCGA TCCGCGAGGT GATCGCGCGG ATCGAGGAGA ACGGGGGCGT CGTCCTCGAT CCGGCAACCG CCGCGATCGA TCAGGCCGCC GGCGTCGCCC TGGCGGCAGA ACTCGGCCAC CGCCGGATAG CCGTGACCAC CGCCGTTGCC GCCGAAGCAG CGGCTATCCG GGAGCGTTTC CCCGGTGCCG TGATCGTCGC CGTCCATACG ACCGGGATCT CACGGGAGGA CGCCGCGCTG ATGGCCCGGT CGGCTGATCT CCTCACCGCC TGCGCCTCGC GTTACGTCCG GGAGGAGGCG GCGAAGACCG CGCTCCTGCA GGCGGGGACG TCGATCCCGG TCTTCGCGAT GACGGCCGCA GGGAAGGCAG TCATCCTCGG GAAAGTCGCG GAGACCGATC AGCAGGTCAT CGTCCACGGA GCGCGCCTCC CGGTGCCGGG ATCGCAATCG CCCTCGCCGC TCCGCTGA
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Protein sequence | MSDRDEHIVE AAGRCLVVIR NGRVVEVGTP QIEDCPLARR FAFPVKEMTT EEIRKNIEER IRSFGMCTPE REVLAGPDFV LFGASELLSS AVRRGDLDAA VIASDGAGTL VATNPALIQG IGGRMSGLVK TSPIREVIAR IEENGGVVLD PATAAIDQAA GVALAAELGH RRIAVTTAVA AEAAAIRERF PGAVIVAVHT TGISREDAAL MARSADLLTA CASRYVREEA AKTALLQAGT SIPVFAMTAA GKAVILGKVA ETDQQVIVHG ARLPVPGSQS PSPLR
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