| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1535 |
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| Symbol | |
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| ID | 4847850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1540864 |
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| End bp | 1541505 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640116228 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001047446 |
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| Protein GI | 126179481 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00037807 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAACA CCCTCTTCGA CCTTGTCGGA GCGATGCGGG AGGCGTGCCG GTGCGTGGTC
GACTATCTCG GAACCGGCGA CCCGGAAGCG CTCTTTTCGC AATTTCTCCG GGGAATTCAC
GGGTTCGAGG ATCACGAGAA CATACGCGAC TACATGAGCG AACTCGGGGT CTATGAGCCC
GGAACGTTCG AGGTCTGCTG CCGCACCTAC GAGGACGTGA AACTCGGTCT GGTCGAAGCC
TACCCGGGCG TCGAGGAGAC GCTCCGGGGC CTCCGGGACG CCGGGATCTC TCTCGCGGTC
GTGACCGACG CGGAGGCGCC CCAGGCACGC CGGCGGCTCG ATAAGACCGG GCTCATCGAC
TACTTCGAGA CCGTGGTGAC CCCGGAGGTC TCGGGCAGGC GAAAACCGGA GCCCGACTCC
CTCCTCTACG CTCTCCAGCG GCTCGATGCC TCCCCGGCGC GGGCGATGAT GGTGGGCGAC
AGCCTGATTC GCGATATCGC GCCCGGGAGG CATCTCGGGA TGGTGACCGC GTTCGCCGCC
TACGGCGACT GGCGCGACGG CAGCCCGGCA GATGTACAGG CCGATATCGT TCTGGCCGAG
TTCGCCGAAC TCGCGGGCCA CGTGGGCATT ACGGGCCGGT GA
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| Protein sequence | MDNTLFDLVG AMREACRCVV DYLGTGDPEA LFSQFLRGIH GFEDHENIRD YMSELGVYEP
GTFEVCCRTY EDVKLGLVEA YPGVEETLRG LRDAGISLAV VTDAEAPQAR RRLDKTGLID
YFETVVTPEV SGRRKPEPDS LLYALQRLDA SPARAMMVGD SLIRDIAPGR HLGMVTAFAA
YGDWRDGSPA DVQADIVLAE FAELAGHVGI TGR
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