| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1513 |
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| Symbol | alaS |
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| ID | 4846756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1516273 |
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| End bp | 1519020 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640116205 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001047424 |
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| Protein GI | 126179459 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAGG AAGAATATAC GCTCGATTAT TTCAGGTCCG AAGGGTTTGA GCGGAAGGTC
TGCAAGAGTT GCGGGGCGGC CTTCTGGACC CGGGACCCCG AACAAGAGTT CTGCGGCGAC
GCTCCGTGTG TAACGTATAA CTTCATCGGC AACCCGGTCT TCAAACCTCA TAACGTCAGC
GAGATGCGGG AGGCGTTCCT CTCGTTCTTC GAGCGGCACG GTCATACACG CCTCGAACGA
TATCCCGTAG CCGCCCGGTG GAGAGACGAT ATCTACCTCA CCATCGCGTC CATCGCCGAT
TTTCAGCCGT TCGTCACGAG CGGGGTCGTT CCCCCGCCGG CGAACCCGCT GACCATCTCC
CAGCCCTGCA TCCGGTTAAA CGACCTCGAC TCGGTAGGGA GATCCGGGCG CCACCTGACG
CTCTTTGAGA TGATGGCGCA CCACGCCTTC AACACCCCGG AGGAGCAGAT CTACTGGAAG
GACCAGACGG TCGCCCTCTG TGACGAGTTC ATCAAGTCCA TCGGCGGCGA TCCCGCCCGT
GTCAGCTACA AGGAGCACCC GTGGTACGGC GGCGGGAACG CCGGAGCGTC CGTCGAGGTG
CTCATCGGCG GTCTCGAGGT CGCGACGCTG GTCTTCATGA ACCTCGGGCG GCAGAAGACC
GATCAGCCGC CCGTCGACGT GAACGGGGTG CCCTACTACC CGATGCGGCT GAACATCGTG
GACACCGGCT ACGGCCTTGA GCGGCTCGTC TGGGCCTCGA AGGGTTCGCC GACGATCTAC
GATGCGGTCT TCCCGGAGAT GGTGAGCCGC CTGATGCGGT CGGCCCGTCT CGAGGACCTC
CTCGACAACC CGGAGTTCAC GAAGATCATG GGGCTCAGCG CCCGGTTCGC CGGGGTTATG
GACATCTCCG GGACGAACCT CTACAACCTC CGGAGGAAGG TCGCCGAGGC GATCGACGTA
CCTGTCGAAC GGCTCGAACG GATCGTCGTT CCGATCGAGA AGGTCTACTC GATCGCCGAC
CACACCCGCT GCCTCGCCTA CATGCTCGGG GACTGCATCG TCCCCTCGAA TGTCCGGGAG
GGCTACCTCG CCCGGCTCGT GCTTCGTCGG ACGCTCCGGA TGATGAACGA CCTCTCGATG
GACGACGCCC TCACGGACCT GATCGAAGCA CAGATGCAGG TCGTGGGCGC CGAGAACTTC
GAGCAGGACG TGGACGCGGT CCGGGAGATC GTGGAGAACG AGGAGGCGCG GTACGCAAGC
ACTCTCGAGC GCGGGGCCCG GATCGTCCAG AAGATCGCCC GGAACTACAG GGCAAAGAGT
TCCCGGGTTC CCCTCGAGGA GGTCATCACC CTCTACGACT CGCACGGCAT CCCGCCCGAG
ATGGTGAAGG AGGTCGCTGC CGCCGAGGGC GCCGTCGTGG AGATCCCCGA CAACTTCTAC
TCGCTGATCG CCGAGACGCA CTCGGAGGCG CAGAAGGAGG CGAGGGGAGA AGACCCGCTC
GACGCCTACC GCGAGCGTGC GGTTTCCCTC CCCCCGACGA AGAAACTCTA CTACGAACTC
CCGAACGAGG TCGAGTTCGA GGCGATGGTG CTGGATTACT TCGACGGGAT GGCGGTGCTG
GACCAGACGC TCTTCTACCC CGAGGGCGGC GGCCAGCCGT CCGATACCGG CACCCTGGTG
ACATCCGAGA GCATGGTGCG GGTGGAGGAG GTCGTGAAAC TCGGCGAGGT GATCCTCCAC
CGGGTCACGG GCGGCCCCCT GATGCGCGGC GACCGGGTGA AGGGCATGGT GGACGAGGAA
CGCCGGTGGT CGCTGATGCG CCACCACACG GCGACCCACG TTCTCCTGCA TGCCGCCCAG
CAGGTGCTCG GCGTCCACGT GCACCAGGCG GGCGCCCAGA AGGGAAGCGA GGTTTCCCGC
CTGGACATCC GGCACTACAG ACATATCACG CCCGATGAAC TCAGGAGGAT CGAGCTCGAG
GCGAACCGGC TGGTCATGGC CGATACGCCG GTCTACATCC ACGTCGAGGA GCGGACGAAG
GCCGAACAGA AGTACGGGTT CGGCCTCTAC CAGGGCGGCG TCCCGCCGGG CCGGGAGATC
AGGACGGTGC AGGTCGGCGC CGACGTGCAG GCGTGTGCCG GAACGCACGT CCGCACGACC
GGTGAGATCG GGCCGATCCG GGTCCTCGGC GTCGAGCATA TCCAGGACGG CGTCGAGCGG
CTGGTCTTTG CGGCCGGTAT CGCCGCCGTG CATGCCGTGC AGCACCTGGG CGACCTCCTC
CAGGAGTCCG CCGACATGGT GAGCGTCCAG CCCGAGAACC TGCCGGCGAC GGTAGCAAGA
TTCTTCTCGG AATGGAAGGA ACAGAAGAAG GAGATTGAAC GTCTCCAAAA GAAAGTGGTG
GACCTCGAGA TGCAGAATCT CGACGGCGAG GTTGTGGACG GGGTCAGGGT CGTCGTCAGA
ACGCTCGATG CGACCCATAA GGAACTCGTC GCACTCGCCA CGACCGTCGC CGACGAGGGC
GGCGTGGCGC TCTTTGCCTC AAGTGACGGC ACCGTGAAGG TGGTGGCGAC GTCGGGCGCC
CCGACGGTGA ACGCCGTCGA TATCGTGCGG GAGGTCTGCG GCATCCTCGG CGGGAAGGGG
GGCGGCAAGC CGAACCTTGC GCAGGGCGCG GGTCCGGACG CCTCCCGTCT CGAAGAGGCG
CTCGAATACG GGCGCAACAG AATTATCGAA GCACTCCATG GCGAATGA
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| Protein sequence | MLEEEYTLDY FRSEGFERKV CKSCGAAFWT RDPEQEFCGD APCVTYNFIG NPVFKPHNVS
EMREAFLSFF ERHGHTRLER YPVAARWRDD IYLTIASIAD FQPFVTSGVV PPPANPLTIS
QPCIRLNDLD SVGRSGRHLT LFEMMAHHAF NTPEEQIYWK DQTVALCDEF IKSIGGDPAR
VSYKEHPWYG GGNAGASVEV LIGGLEVATL VFMNLGRQKT DQPPVDVNGV PYYPMRLNIV
DTGYGLERLV WASKGSPTIY DAVFPEMVSR LMRSARLEDL LDNPEFTKIM GLSARFAGVM
DISGTNLYNL RRKVAEAIDV PVERLERIVV PIEKVYSIAD HTRCLAYMLG DCIVPSNVRE
GYLARLVLRR TLRMMNDLSM DDALTDLIEA QMQVVGAENF EQDVDAVREI VENEEARYAS
TLERGARIVQ KIARNYRAKS SRVPLEEVIT LYDSHGIPPE MVKEVAAAEG AVVEIPDNFY
SLIAETHSEA QKEARGEDPL DAYRERAVSL PPTKKLYYEL PNEVEFEAMV LDYFDGMAVL
DQTLFYPEGG GQPSDTGTLV TSESMVRVEE VVKLGEVILH RVTGGPLMRG DRVKGMVDEE
RRWSLMRHHT ATHVLLHAAQ QVLGVHVHQA GAQKGSEVSR LDIRHYRHIT PDELRRIELE
ANRLVMADTP VYIHVEERTK AEQKYGFGLY QGGVPPGREI RTVQVGADVQ ACAGTHVRTT
GEIGPIRVLG VEHIQDGVER LVFAAGIAAV HAVQHLGDLL QESADMVSVQ PENLPATVAR
FFSEWKEQKK EIERLQKKVV DLEMQNLDGE VVDGVRVVVR TLDATHKELV ALATTVADEG
GVALFASSDG TVKVVATSGA PTVNAVDIVR EVCGILGGKG GGKPNLAQGA GPDASRLEEA
LEYGRNRIIE ALHGE
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