Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1478 |
Symbol | |
ID | 4846770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1472174 |
End bp | 1472668 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640116170 |
Product | hypothetical protein |
Protein accession | YP_001047389 |
Protein GI | 126179424 |
COG category | [S] Function unknown |
COG ID | [COG1673] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.939784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACTA TCAAACCAAA CATTTACGTC ATTTTCTTAC AATCACTCTG CATGACACGT TGGCTCGCAA TATCCAACCG GACAAACTGG GAGATCACCC GGAAGAAGAA TATCTGGGGT GTCCCTCAGC GCAATAAGAG CATTATTGAA CGGGTGAAGC CTGGCGACAC GGTCCTCATC TATGTATCAC AGCAGAAAGA GGGGGACACG CTGCTGCCAT CCGCTGTGAC CGGAGCATTC GAGGTAGTAT CAGAGCCCTA TGAGGAGCGA ACGAAGGTGT TTGTCGCACC CGAGCAGATG GGTGACGAGG TCTTCCCATA CCGGATAAAA CTGAAGCCCG TAAACGTTTT CGACCTCCCA GTGGAGTTCA AGCCGCTCAT CCCAAAGCTG AAATTTATTA CCAATAAAAC GATGTGGACC GGGCATATAC GACAGGCGAT GCGGGTGATT CCTGAAGAGG ACTACCAAAC AGTCTTGGAC GCTGCAAAAC CCTAA
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Protein sequence | MRTIKPNIYV IFLQSLCMTR WLAISNRTNW EITRKKNIWG VPQRNKSIIE RVKPGDTVLI YVSQQKEGDT LLPSAVTGAF EVVSEPYEER TKVFVAPEQM GDEVFPYRIK LKPVNVFDLP VEFKPLIPKL KFITNKTMWT GHIRQAMRVI PEEDYQTVLD AAKP
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