Gene Memar_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1478 
Symbol 
ID4846770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1472174 
End bp1472668 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content50% 
IMG OID640116170 
Producthypothetical protein 
Protein accessionYP_001047389 
Protein GI126179424 
COG category[S] Function unknown 
COG ID[COG1673] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.939784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACTA TCAAACCAAA CATTTACGTC ATTTTCTTAC AATCACTCTG CATGACACGT 
TGGCTCGCAA TATCCAACCG GACAAACTGG GAGATCACCC GGAAGAAGAA TATCTGGGGT
GTCCCTCAGC GCAATAAGAG CATTATTGAA CGGGTGAAGC CTGGCGACAC GGTCCTCATC
TATGTATCAC AGCAGAAAGA GGGGGACACG CTGCTGCCAT CCGCTGTGAC CGGAGCATTC
GAGGTAGTAT CAGAGCCCTA TGAGGAGCGA ACGAAGGTGT TTGTCGCACC CGAGCAGATG
GGTGACGAGG TCTTCCCATA CCGGATAAAA CTGAAGCCCG TAAACGTTTT CGACCTCCCA
GTGGAGTTCA AGCCGCTCAT CCCAAAGCTG AAATTTATTA CCAATAAAAC GATGTGGACC
GGGCATATAC GACAGGCGAT GCGGGTGATT CCTGAAGAGG ACTACCAAAC AGTCTTGGAC
GCTGCAAAAC CCTAA
 
Protein sequence
MRTIKPNIYV IFLQSLCMTR WLAISNRTNW EITRKKNIWG VPQRNKSIIE RVKPGDTVLI 
YVSQQKEGDT LLPSAVTGAF EVVSEPYEER TKVFVAPEQM GDEVFPYRIK LKPVNVFDLP
VEFKPLIPKL KFITNKTMWT GHIRQAMRVI PEEDYQTVLD AAKP