| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1415 |
|---|
| Symbol | |
|---|
| ID | 4847893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1406346 |
|---|
| End bp | 1406759 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640116105 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047326 |
|---|
| Protein GI | 126179361 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTA CGACGATAAA AGTAGATACG CACGGCGAGG GGGAGATCGT CGACCTCACG
CCCAGGGTGG CGCAGGCGGT CGCCGAGAGC GGTGTTCGGG AAGGCCTCGC GAACGTCTTC
GTCGCGGGCT CGACCGCCGC CGTCACCACC ATCGAGTACG AGCCCGGCGT GCTCTCCGAT
CTCTCCCGGG CGCTCTCGGT CATCGCCCCG GCCGATATCC CCTACGCCCA CGATGCGGCG
TGGGGCGACG GCAACGGCCG CTCCCACGTC AGGGCGGCAA TCGTCGGCCC GTCGATCTCT
ATTCCGGTCA TCGCCGGTGC GCTCGCGTGC GGCACCTGGC AGCAGATTGT CCTCTTAGAA
CTCGACGTGC GGTCGAGGCG CGAGCGCACG GTCTACGTCA CCGTCACGGA CTGA
|
|---|
| Protein sequence | MFRTTIKVDT HGEGEIVDLT PRVAQAVAES GVREGLANVF VAGSTAAVTT IEYEPGVLSD
LSRALSVIAP ADIPYAHDAA WGDGNGRSHV RAAIVGPSIS IPVIAGALAC GTWQQIVLLE
LDVRSRRERT VYVTVTD
|
|---|
| |