| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1399 |
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| Symbol | |
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| ID | 4846966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1390780 |
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| End bp | 1392051 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640116089 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_001047310 |
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| Protein GI | 126179345 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.770816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCCT CGCCCCATCC CCTCGAGCAG GAACTCGGGA TGCGCTACTA CGCGTCCGAT
GCCCCCGGTA TCGGCGGCCG GCTCCGCGTA AGCCCCGCCG ACTTCGTCGT CGAGGAACTC
CCGCTCCCGA TCAGCGACCA GAACGGCCCG CACCTCATCT GCCTGCTCAC CAAGACGAAC
TGGGAACTCC AGCGGGCGGT CAAGGAGATC GCAAAACGGC TCGGCATCAG CCACCGGCGG
ATCGCCTGGG CGGGGACGAA GGACAAGAAC GCGGTGACCA CCCAGTTCAT ATCGATCTAC
AACGTCACGC CGGAGGCCGT TGAACAGGTG CACCTTGCGG ACATCTCGCT CGAGGTCGTC
GGGCGGTCGC AGCACCCGCT CTCCCTCGGC AGCCTCGCGG GCAACCGGTT CGATATCGTC
ATCCGCGACT GCATCGAAGA CGGCCTCCCG GCGCGGGTGC AGGCGGCGAC GGAGGTGGCG
TCCGCCGGGA TACCGAACTA CTACGGGCTG CAGCGGTTCG GCGTCGTCCG GCCGGTCACG
CATCTGGTCG GCGAGAGGAT CCTCAAGGGC GATTACGAAG GCGCCGTGGC CATCTACATC
GGCCGGGCCT ACCCCCGGGA GTCGGAGGAG GCACAGCGCG CCCGGACTCA TTTCACCGAG
ACCCACGATG CACGGGCGGC GCTCGCCGAC TTACCCATAT GGATGACCTA CGAGCGGGCG
ATGGCGAACC ACCTCGTCGC GAACCCCGGC GACTACGCCG GCGCGCTCCG GGCGCTCCCC
CCGAAACTCC TCTCGCTCCT CGTGAGCGCA TACCAGTCCT ACCTCTTCAA CTGCGCGCTC
TCCTCCCGCA TCGATGCCGG CATGTCGCTC ACCGAGCCCG AGATCGGCGA CCGGCTCCTC
TTTGAGAACA GCCGCGAGGA TATCGTCTCC GCGCGGAACC GGCAGGCGGC CCTGATGCAT
GTTCGCCGCG GCCGGTGCCG GATCGCCCTC TTCATTCCGG GCTCTGGACA GGTGACATCG
CGCGGGCCGA TGGACGAGAT GATGCAGGAA CTGATGATCG AGTCGGGTAT CGACGCCGGG
GACTTCGAGC GCGCCTCCCG GTTCGTGGAG ACGGCGTTTT CCGGGGTGCT CCGGCCGATC
AGCCTCTCCG CCGACGTGGA GACGGAGGTA TCCGGTGCGG ATGTCCGGCT CAAATTCACG
CTCCCTCCCG GCCACTACGC GACGACGGTC TGCCGGGAAT ACATGAAGGC CGACCCCTAC
ATGATGATCT AG
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| Protein sequence | MMPSPHPLEQ ELGMRYYASD APGIGGRLRV SPADFVVEEL PLPISDQNGP HLICLLTKTN
WELQRAVKEI AKRLGISHRR IAWAGTKDKN AVTTQFISIY NVTPEAVEQV HLADISLEVV
GRSQHPLSLG SLAGNRFDIV IRDCIEDGLP ARVQAATEVA SAGIPNYYGL QRFGVVRPVT
HLVGERILKG DYEGAVAIYI GRAYPRESEE AQRARTHFTE THDARAALAD LPIWMTYERA
MANHLVANPG DYAGALRALP PKLLSLLVSA YQSYLFNCAL SSRIDAGMSL TEPEIGDRLL
FENSREDIVS ARNRQAALMH VRRGRCRIAL FIPGSGQVTS RGPMDEMMQE LMIESGIDAG
DFERASRFVE TAFSGVLRPI SLSADVETEV SGADVRLKFT LPPGHYATTV CREYMKADPY
MMI
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