Gene Memar_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1395 
Symbol 
ID4846349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1387524 
End bp1387838 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content56% 
IMG OID640116085 
Producttranscription termination factor Tfs 
Protein accessionYP_001047306 
Protein GI126179341 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID[TIGR01384] transcription factor S, archaeal 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTCT GTCCGCAGTG TAAAGGTCTG ATGATATCGT CCGGTGGTCA GCTGAAATGC 
AAAAAATGTG GCTATATCCG GGAGATCGAT GATTCCGACC GGTTGAAGAA GACAGACAAA
CGTGTGGAGA AAGAGATCAC CATCGTCGAC GAGGAGGACA AGATAGCGAC CCTCCCGACC
GCGAGCATCA AGTGCCCGGA GTGCGACTGC ACGACGGCAT TCTGGTGGCT GCGGCAGCTG
CGTGCGGCTG ATGAGAGCGA AGTCAGGTTC TTCCGGTGCA CCGCCTGCGG CAAGACCTGG
CGCGAGTACG ATTGA
 
Protein sequence
MMFCPQCKGL MISSGGQLKC KKCGYIREID DSDRLKKTDK RVEKEITIVD EEDKIATLPT 
ASIKCPECDC TTAFWWLRQL RAADESEVRF FRCTACGKTW REYD