| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1388 |
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| Symbol | |
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| ID | 4846791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1381456 |
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| End bp | 1382019 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640116078 |
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| Product | transcription factor |
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| Protein accession | YP_001047299 |
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| Protein GI | 126179334 |
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| COG category | [K] Transcription |
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| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAGC ACAGACCAGA GGAGTCCCTC AAGATAGAAA ATATCGTCGC TTCCGCGAAA
GTGACGGATT CTCTTGATCT GCCTTCTCTT GCTTCCCGGC TGAAGGACGC GGAATACAAT
AAAAAGCGGT TCCCCGGCGT CGTTCTCCGG ATGCAGGACC CGAAAATCGC CGCGCTCGTC
TTCGGTTCCG GCAAGGTCGT CCTGACCGGT GCAAAGAGCA TCGACAACCT CTCCCGGGGC
CTGCAAATCC TCGCCGATCA GTTGCGGGCG CTCGACATCG ACATCCCCGA GAACCCTGAG
TATAAGATCC AGAACATCGT CACGTCCGCA GACCTCGGGA CGCCGATCAA CCTCAATAAG
ATCGCCGTGG GCTTCAATCT GGACAAGATC GAGTACGAGC CCGAACAGTT CCCCGGGCTC
GTATACCGGC TCGACGACCC CAAGGTGGTC GTCCTCCTGT TCGGGTCCGG CAAACTGATC
ATCACGGGCG GCAAGGTGCC CGAGGATGCC CAGCGTGCGG TAAAGCGGAT TCTCTCCGAA
CTCTCCAGTC TCGGTCTCAT CTGA
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| Protein sequence | MNEHRPEESL KIENIVASAK VTDSLDLPSL ASRLKDAEYN KKRFPGVVLR MQDPKIAALV
FGSGKVVLTG AKSIDNLSRG LQILADQLRA LDIDIPENPE YKIQNIVTSA DLGTPINLNK
IAVGFNLDKI EYEPEQFPGL VYRLDDPKVV VLLFGSGKLI ITGGKVPEDA QRAVKRILSE
LSSLGLI
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