| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1375 |
|---|
| Symbol | |
|---|
| ID | 4848063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1366762 |
|---|
| End bp | 1367322 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640116065 |
|---|
| Product | flagellin-like protein |
|---|
| Protein accession | YP_001047286 |
|---|
| Protein GI | 126179321 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1681] Archaeal flagellins |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGGG AAGACTGGGA CGATCGGGCG TTCACCGGAC TGGAAGCGGC CATCGTCTTC
ATCGCCTTTA TCGTCGTCGC AGCGGTCTTT GCGTACGTCG TTCTCGGGGT GGGCATGACC
ACGTCGCAGA AGAGCCAGGA GACGATGCAT GCCGCTCTCG GGGAAGCCGG ATCCGCCCTC
CGCCCGGGAC AGTCGGTCAT CGCCAAGCTG GATAACAATC AGGGTTTTCT TGATTCCATA
GAGTTCGATC TCGAGACCGC GACCGATCTC GCCGTCATCG ATATGGGGAG CATGACCTAC
ACCGTCGCCA CGAAGAAGAC TCTCGTCACG TTCCCCCCCG GCGACCCCGC CGTAACCGTC
ACCTGGCGGT ATCCGGAAGA TGGCGGACCC CTCCTTGAGA CTGGGGAGGT CGTCACGGTG
AGACTGGAGA TGGAAAGTGT TGAGGTTGGA CGCGGAGACA CGTTCACCCT CCAGATGACC
GCCGCAGGGG GAGAAACCGC TGCGCTGACC AGAAACGTTC CCGCCGGTAT TGGAAAGAAT
GTCTACGTCG AACTCTTCTG A
|
|---|
| Protein sequence | MPREDWDDRA FTGLEAAIVF IAFIVVAAVF AYVVLGVGMT TSQKSQETMH AALGEAGSAL
RPGQSVIAKL DNNQGFLDSI EFDLETATDL AVIDMGSMTY TVATKKTLVT FPPGDPAVTV
TWRYPEDGGP LLETGEVVTV RLEMESVEVG RGDTFTLQMT AAGGETAALT RNVPAGIGKN
VYVELF
|
|---|
| |