Gene Memar_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1362 
Symbol 
ID4846925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1354482 
End bp1355324 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content69% 
IMG OID640116052 
Producthypothetical protein 
Protein accessionYP_001047273 
Protein GI126179308 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCTCT TTGGAGGGCT CCTCGCACCG GTCACCCTGG TGTACAGCCT CCCCGGAACG 
CCTGCGGCGA CGGCGGCTCT CCTCCTGAAC TTCGAGGCCG TTGCCACGAC GCTGATTGCC
GCGACGATCT TTCGCGAGTG GGTGAGCCGC CGCGTCTGGG TTGCGCTCGG GTGCATCACC
GCATCGTGCC TCCTCCTCAC CTGGAACCCG GCCGCCGGAC TCGGCCTCTC CCTCCCGGCA
CTCGGCATCC TGCTCACCTG CCTCTTCTGG GCGGTCGACA ACAACCTGGG ACAGCGGCTC
TCGGCGAAGG ATCCCCTCCT CGTCATCTCT GTAAAGGGGA TCGGCGCCGG CACCGTCACG
CTCCTCGTCG CGCTCACCGC CGGGGAGCAC CTCCCGGCCA CGGCCACGGC TGCCGCCGCC
ATGGCGGTCG GGTTCCTCTG CTACGGGGGC CTGACGAGCA TCCTCTTCCT CCTCGCCCTC
CGGGGCATCG GTGCAGCCCG GGCAGGTTCG CTCCTTGCCG TCTCCCCGTT CTTCGGCGTC
CTCTTCTCGC TCCTGCTCTT CGCCGAACTT CCGGCAGGCG CCTTCTACGT CGCGCTGCCC
GTCATGGCCA TCGGGGCCTG GCTGATGATC TCCGAGGAGC ATTCGCACCC TCACCGGCAC
CCGGGCGTCG TCCACGAGCA CCGCCACCGC CACGACGACC AACACCACGA CCATGACCAC
GAGGCCGGCG ACCCGCCGCT CTCGGCGGCC GGCGAGCATT CCCATGTGCA CGCCCATGCC
GAACTCGCCC ACGAGCACCC GCACCAGCCC GATATTCATC ACCGGCATTT GCACCGGCGG
TAG
 
Protein sequence
MTLFGGLLAP VTLVYSLPGT PAATAALLLN FEAVATTLIA ATIFREWVSR RVWVALGCIT 
ASCLLLTWNP AAGLGLSLPA LGILLTCLFW AVDNNLGQRL SAKDPLLVIS VKGIGAGTVT
LLVALTAGEH LPATATAAAA MAVGFLCYGG LTSILFLLAL RGIGAARAGS LLAVSPFFGV
LFSLLLFAEL PAGAFYVALP VMAIGAWLMI SEEHSHPHRH PGVVHEHRHR HDDQHHDHDH
EAGDPPLSAA GEHSHVHAHA ELAHEHPHQP DIHHRHLHRR