| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1267 |
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| Symbol | |
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| ID | 4848010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1247820 |
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| End bp | 1249292 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640115957 |
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| Product | Alpha-amylase |
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| Protein accession | YP_001047179 |
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| Protein GI | 126179214 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.365279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGGCG AGGGCGCAAA TCCACCAAAG GTCTGCCTGG GATTCGATAT TCATTATCCA
TGCTATCTCA ATCCCGGGTT TCAACCTGAT CTGGTAAAGG GAAAGAGAAA CGTAAAAGAG
AGTTACTTTA ACCCGGACGT GAAGGAAGAC CTGAGAGGGG TCATCGACCG CTCCTTCCGA
CCGACGACGG AACTCCTCCT CGAACTCCTC GATGAGGGGT TTACGTGCGC CTTTGCGATA
TCCGGAACGG TGGTGGAGAA CCTCGATGCG TGGTACCCGG AGATGCTCGA ACTTCTCTCC
CGTGCGGCAA CTCACCCAAA CGCCGAACTC CTCGCCGGAA CCTACTACCA CAGCGTCGCC
GGGCAGTTCA CCGATCTCAC GGAGTTCACG GACGAACTTC TCATGCACCG GAACCTGATG
AAGGAGCACT TCTCGGTCAC GCCGACCACG TTTGCGCATA CCGATTACCC GATCACCCCG
ACCACCGCAG AGGCGCTTGC CGGGGCCGGA ATTGAGGCGG CCATCATCGA GGGAGGGGAG
GGCCCCGCTC TTGAGAGGGA CCCGAACCAT ACCTACACCT ACCGGGGCCT CCCGGTCCTC
GTCACCCACT GCGACCTCTC CGACGATATC GCCGTGCGGT TTCCGTGGCG GGGGTGGGAC
AAGTGGCCGC TGATGGCCGG CCAGTATGCG GGGTGGCTCT CCGTATCCCC CGGCGACTAC
ATCACGCTCT TCCTCGACTA CCGCATCTTC GGGGACTTCA TCGGGGCCGA GGCGGGCATC
CTCGAGTTCC TGCGTGCGCT CCCGTCCGCC CTCGCCGCGG AGGGGATAGA GACCATACGT
CCCTCAGACG CCGCCCGGCT TCCACCGCAC GAGGAGATCG GGGAGATCGG GGAGATCGGG
GAGACCGGCG ACCCGACCGG CTCGCTGGGC CGGCAGAGGA ACATTATGCA GCAGTCCGCC
CTCGAGGCAC TCGAGGAGGC CGGGGGCCTG GTGACAGACC CGGAGATCTG GCGCTGCCTC
CTTGAGACCG AGCATATTCG CCGGATGGCC ATGCGCTCGA CCTCGTGCGG AAAACCGCTT
CACGCCGTCA GCCACCAGGC GACCTACGAC TACTTCGCCT CATTTATGCG GATCCTCTCG
CACGCCGAGG AGCGGTCTGC AATCATCGCC CGGTCGCCCA AGGCCGCTCT CTCGCTCCGT
TGCGTCCCCC CGGATAAGGC GTTCTACTTC TCGTCATATG ACCGGCCGGC CGGGTATGCC
GCCCACAGTC TCCAGGAACT CGCAAATATG CTCGAGTTTG CCCCGGACGA TGTCATCCGG
TACCACGTGG AGCGGGAGGA CTTCAACCGC TGGATCGCCC AGGTCATCGG CGATACGCAA
CTGGCGGAGA AGATCTGGGG CATCTACGAC CGCAGGAGAC TCCGAACGAT GATTCAGAAG
AGGATCAACA AACTATGGAA ACGCTTAAGT TAG
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| Protein sequence | MTGEGANPPK VCLGFDIHYP CYLNPGFQPD LVKGKRNVKE SYFNPDVKED LRGVIDRSFR
PTTELLLELL DEGFTCAFAI SGTVVENLDA WYPEMLELLS RAATHPNAEL LAGTYYHSVA
GQFTDLTEFT DELLMHRNLM KEHFSVTPTT FAHTDYPITP TTAEALAGAG IEAAIIEGGE
GPALERDPNH TYTYRGLPVL VTHCDLSDDI AVRFPWRGWD KWPLMAGQYA GWLSVSPGDY
ITLFLDYRIF GDFIGAEAGI LEFLRALPSA LAAEGIETIR PSDAARLPPH EEIGEIGEIG
ETGDPTGSLG RQRNIMQQSA LEALEEAGGL VTDPEIWRCL LETEHIRRMA MRSTSCGKPL
HAVSHQATYD YFASFMRILS HAEERSAIIA RSPKAALSLR CVPPDKAFYF SSYDRPAGYA
AHSLQELANM LEFAPDDVIR YHVEREDFNR WIAQVIGDTQ LAEKIWGIYD RRRLRTMIQK
RINKLWKRLS
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