| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1218 |
|---|
| Symbol | |
|---|
| ID | 4848310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1199553 |
|---|
| End bp | 1200014 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640115908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001047131 |
|---|
| Protein GI | 126179166 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3430] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCA AGAATGAAGA AGCAGTGTCG CCGGTTATCG GCGTTATCCT GATGGTCGCC
ATCACGGTGA TCCTCGCCGC GGTTATTGCG GCGTTCGTGT TCGGAATGGC AGGGAATGTC
GGTACGACGA AGAACGTTGC GGCAACGGCA ACCCAGCAGG GCAGCGACAA GATTGTCATC
ACCTACCAGG GCGGGGCAGA CGCGCCGGAC GTAGAGTGGT TAGGTATAAC CGCACCAAAC
GGCACTGTAT TCCGAACCTA TGATGATGGC ACCGGTAAGC TCGTAATCGA TGACGTGGAC
ACAACCGCCC TAACGGATGA GAAGGCCCCC GCTGTAGGTG CAACGATGAC TCTGCACTAT
GACGACACTG ATACTGAGGA ATGGACGGGG AGAGACCACG TTGTTGTGAC CGCCCACTTC
AGCGACGGTG CGGACCAGGT CATTCTGGAC ACCTACGTCT AA
|
|---|
| Protein sequence | MNFKNEEAVS PVIGVILMVA ITVILAAVIA AFVFGMAGNV GTTKNVAATA TQQGSDKIVI
TYQGGADAPD VEWLGITAPN GTVFRTYDDG TGKLVIDDVD TTALTDEKAP AVGATMTLHY
DDTDTEEWTG RDHVVVTAHF SDGADQVILD TYV
|
|---|
| |