Gene Memar_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1180 
Symbol 
ID4846381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1157397 
End bp1158242 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID640115870 
Productrespiratory-chain NADH dehydrogenase, subunit 1 
Protein accessionYP_001047093 
Protein GI126179128 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAT ACCTGCTCTT TGCCACCTTC ATCGGCCTGC TCTTCCACGG CATCCACCGG 
AAAGTCATCG CGAGAGTCCA GGGACGCCCC GGACCGCCGA TCTGGCAGGA GATCCTGCAC
ACCCTGAAGT TCTCCTTCAA GGAGACCTGG ATACCAAAGA CGGCCAGCCA GACGCTCTTT
GTGGGGATCG TCTTCGTCGC CATCGCCATC TGGAGCGGAG CCCTCTTCAT CCTCCTCTCG
GGAGGGAGCA TCCTCCTCCT CTTTGCGGTC TACCTTCTCC ACAAGATCGT GGAGCACGGG
ATGGGGCTCT CGACAGGCTC GCCCTACACG AAGTTCGGGG CTATCCGGTC GGTCATATCG
GCGGCGTCGG AGCTCCCGCT CCTCGTCACC GTCGTCGCGA TCTACTTCTT CACCCACTCG
CTCTCGATCG CGGATATCGC GGCCTACCAG GAGGTTCACG GCCCGCTCCT CATCCTCGCG
TTCCCGGCGG CCGTGGCGAT GTACCTCGTG ATCCTCTCCA AGATGCACTA CGGCCCGTTC
TCGATCATCG AGGCGAAGGA GATCGTGAGC GGGAACATGA CCGAACACTT CGGGGTCTGG
CGCGCCGGGC TCGAGGTGGC GTACGCCCTC AAGACCTACG TGCTCCTCTA CGCGTTCGTC
CTCATCTTCA TCGGGGCTCT GCCGCTCTGG CTGACGCTGC TCGTGATGCT CCTCGTCCTG
GTATCGCTCT CGTTCGTCTG CGCCGTCACT CCCATGCTCT CGCCCTACGA CACCGTGACG
ATACAGACCC TGGTGACGGG AGCGCTCGTC ATCTACATCG TCATCCTCGG GGTGGTCATG
GGATGA
 
Protein sequence
MIEYLLFATF IGLLFHGIHR KVIARVQGRP GPPIWQEILH TLKFSFKETW IPKTASQTLF 
VGIVFVAIAI WSGALFILLS GGSILLLFAV YLLHKIVEHG MGLSTGSPYT KFGAIRSVIS
AASELPLLVT VVAIYFFTHS LSIADIAAYQ EVHGPLLILA FPAAVAMYLV ILSKMHYGPF
SIIEAKEIVS GNMTEHFGVW RAGLEVAYAL KTYVLLYAFV LIFIGALPLW LTLLVMLLVL
VSLSFVCAVT PMLSPYDTVT IQTLVTGALV IYIVILGVVM G