Gene Memar_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1130 
Symbol 
ID4846827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1108431 
End bp1109633 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID640115818 
Producthypothetical protein 
Protein accessionYP_001047044 
Protein GI126179079 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCG CGCTCGCGTC TCCCGGCGAC GGGACCGGCC GGCTCTTCGT TGCGGACCTC 
CCGGGCACCG TCCGGGTCAT CGATGGGAAC GATCACCGGC CGTTCCTCGA CATCACCGAC
CGGGTCGTCG ACCTCCGCAC CGGCTACGAC GAGCGCGGAC TGCTCGGCCT CGCGTTTCAC
CCACGGTTCG CGGAGAACGG CAGGTTCTTC GTCTACTATA GCGCCCCGCT CCGGGCCGGT
GCGCCGGAGG GCTGGGACCA CACGAGCCGA ATATCGGAGT TCTCTGTCTC CACCCCCGAC
CGGGCGGACC CCGGTTCGGA GCGGGTGATC CTGGAGGTCG ACCAGCCGCA GGCGAACCAC
AACGGCGGCT CGATCGTCTT CGGCCCCGAC GGCTGTCTCT ACATCCCGCT CGGCGACGGC
GGCGGTGCCC GCGACGTCGG GAGAGGCCAC CCGCCGGGGG GAAACGGGCA GGATATCACC
ACGCTGCTCG GGAGCATTCT GCGGATCGAT ATCGACGGCG CGGAGCCCTA TGGCATCCCG
GGAGACAACC CCTTCGTCGG AAGAGAAGGG CGGGACGAGA TCTACGCCTA CGGCCTCCGC
AACCCGTGGA GGATGACGTT CGACGCCGGA GGGGAGCACC GGCTCTTTGC CGCCGATGCC
GGGCAGTACC TCTGGGAGTC GGTGAAGATC ATTGTTGCGG GCGGCAACCA CGGCTGGAAC
CTCCGGGAAG GCAACCATGC CTTCGATCCC GAAAACCCCC GCGAGTCGCC GGCAGACGTG
CCCCGGACCG GCCGCCGCGG CGAGCCCCTG ATCGATGCGA TCATCGAGTA CCCGAACGCC
AAGCAGCCCG GCGGCATCGG GCAGGTCGTC ATCGGCGGCT ACGTCTACCG GGGGAGGGCG
ATTCCCCGGC TCTTCGGGCG CTACGTCTTT GCGGAGTGGA ACCGGGCGGG GGCCGACGGC
GAGGGGATCA TCTTCGCCGC GACGCCGCCA AAAGACCCCA ACAGGATGTG GGAGTTTGGT
GAGGTCGAGG TGGCCGGGAG CCGGACCGTG GGAGCATACG TCCTCGCGTT CGGGGAGGAC
GCGGAGCACG AACTCTACGT CCTGACCGCG AAGAGCCGGG GGCCGGCCGG GAAGACGGGG
AGGGTCCACC GGATCGTGCC GCCGCCGGAC GATAGGCCCG GGAAAGACGC TAACCCTGCA
TAA
 
Protein sequence
MPVALASPGD GTGRLFVADL PGTVRVIDGN DHRPFLDITD RVVDLRTGYD ERGLLGLAFH 
PRFAENGRFF VYYSAPLRAG APEGWDHTSR ISEFSVSTPD RADPGSERVI LEVDQPQANH
NGGSIVFGPD GCLYIPLGDG GGARDVGRGH PPGGNGQDIT TLLGSILRID IDGAEPYGIP
GDNPFVGREG RDEIYAYGLR NPWRMTFDAG GEHRLFAADA GQYLWESVKI IVAGGNHGWN
LREGNHAFDP ENPRESPADV PRTGRRGEPL IDAIIEYPNA KQPGGIGQVV IGGYVYRGRA
IPRLFGRYVF AEWNRAGADG EGIIFAATPP KDPNRMWEFG EVEVAGSRTV GAYVLAFGED
AEHELYVLTA KSRGPAGKTG RVHRIVPPPD DRPGKDANPA