| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1069 |
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| Symbol | |
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| ID | 4847429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1056127 |
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| End bp | 1057638 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640115757 |
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| Product | isopropylmalate/citramalate/homocitrate synthases |
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| Protein accession | YP_001046984 |
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| Protein GI | 126179019 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.111067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGTTT TATTTGTTGA ACCGATTCGC TTTTTTGACA CAACCCTACG GGACGGCGAA
CAGACACCGG GTGTCTCTCT CACGCCGGCC GGGAAACTTG AGATTGCAAC GCACCTCGCC
GACGTCGGCG TCCACGTGAT TGAAGCAGGC TCAGCCGCCG CGTCCGTCGG AGAACGCGAG
TCGATCCGTG CCATCGCCGA TGCCGGGCTT GCCGCCGAGT GCTGCACCTA CGTCCGGGCG
CTCCCCGGGG ATATCGACCT TGCCGCCGAC GCCGGTGCCG ACTCCGTCCA CCTCGTCGTC
CCGGTGAGCG ATCTCCATAT CGCGAAAAAA CTCCGTAAGA CCCGCGAGCA GGTCTCTGAA
ATGGCCTGGA GCGCCGTCGA GTACGCGAAA GAGCGCGGTC TCGTCGTCGA ACTCTCGGGA
GAAGACGCGT CACGCGCCGA CCAGGATTTC CTCGCGGAGG TCTTCCGGGA AGGGGTGGAG
CGGGGAGCCG ACCGGCTCTG CTTCTGCGAC ACCGTCGGGC TCCTCACGCC CGAGCGGGCG
GCCGCGATCA TACCGCCGCT CCTCTTCGCC CCGCTCTCCA TCCACTGCCA CGACGACCTC
GGGTTCGGGC TCGCGACCAC CGTCGCCGCC CTCCGGGCGG GGGCGACCTG TGCCCACGTC
ACCGTCAACG GCCTCGGGGA GCGGGCGGGA AACACCTCCC TCGAAGAACT GGTGATGGCG
CTCGAGGTGC TCTACGGGGT CGATACCGGG ATCGCGACCG AAGAACTCTA TCCGCTCTCG
ACCCACGTCG CCCGGCTGAC CGGGGTTCCG CTCGCGACCA ACAAGCCGAT CGTCGGCGAG
ATGGCCTTCA CCCACGAGAG CGGGATCCAC GCCCACGGGG TGATGCGGGA CGCGAGCACC
TACGAGCCCC TCCAGCCGGA GCGGGTGGGG AGGCGGCGGC GGATCGTCCT CGGGAAGCAC
TCGGGGTCGG CGGCGGTCGA GGCCGCGCTC CACGATATGG GCTACGCCCC GAGCGCTGCA
CAGCTCAAGG AGATCGTCGA CCGGATCAAA CGCCTCGGGG ACGCCGGGAT GCGGATAACC
GATGCCGACA TCATGGCGAT CGCCGATACC GTCATGGAGA TCGAGTTTAC GCCGTGCATC
GAACTGCGCC AGTTCACCAT CGTCTCGGGC AGCAACGCGA TCCCGACCGC CTCGGTGACG
ATGCTCGTTC GCGGCGAGGA GATCACCGGC GCCGCCGTCG GGACCGGCCC CGTAGACGCG
GCGATCCGCG CGCTCCAGCG ATCGGTTGCG GACGTCGGGA GCGTGCGGCT CGACGAATAC
AGCGTCGATG CCATAACCGG CGGCACGGAC GCCCTCGTCG ACGTCTCGGT GAAACTCAGC
AAGGACGGGA AGACCGTGAC CTCGCGGGGC GCGAGGACCG ACATCATCAT GGCAAGCGTC
GAAGCAGTTA TCGCAGGGAT GAACAGATTA CTCAGGGAAG AGCATGAAGA CCGGAGCCAG
GACTCTGATT GA
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| Protein sequence | MIVLFVEPIR FFDTTLRDGE QTPGVSLTPA GKLEIATHLA DVGVHVIEAG SAAASVGERE
SIRAIADAGL AAECCTYVRA LPGDIDLAAD AGADSVHLVV PVSDLHIAKK LRKTREQVSE
MAWSAVEYAK ERGLVVELSG EDASRADQDF LAEVFREGVE RGADRLCFCD TVGLLTPERA
AAIIPPLLFA PLSIHCHDDL GFGLATTVAA LRAGATCAHV TVNGLGERAG NTSLEELVMA
LEVLYGVDTG IATEELYPLS THVARLTGVP LATNKPIVGE MAFTHESGIH AHGVMRDAST
YEPLQPERVG RRRRIVLGKH SGSAAVEAAL HDMGYAPSAA QLKEIVDRIK RLGDAGMRIT
DADIMAIADT VMEIEFTPCI ELRQFTIVSG SNAIPTASVT MLVRGEEITG AAVGTGPVDA
AIRALQRSVA DVGSVRLDEY SVDAITGGTD ALVDVSVKLS KDGKTVTSRG ARTDIIMASV
EAVIAGMNRL LREEHEDRSQ DSD
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