| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0868 |
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| Symbol | |
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| ID | 4845919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 844929 |
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| End bp | 846293 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640115554 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001046783 |
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| Protein GI | 126178818 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00767556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTG ATATCCTCCG AGCCCTGATC GCCACCGGTG AAGACAGCCG CCGCCAGTTC
AAGCGCGACG TTACCAACGC CGATGCCCTT GCTGCTGAGA TGGCTGCATT TGCCAATGCC
GAAGGGGGCA CGCTTTTTCT CGGTGTTGCT GACGATGGCT CCGTACTGGG TCTCTCACGC
ACGGATGTGA ATCGACTCAA CCAGCTCATC AGCAACGCGG CCTCTCAGCA CGTGAAGAGC
CCGTTGACGG TACAGACTGA GAATGTTCAG GTGGATGAAG ATCGCATCGT CATCGTGCTC
ACCGTTCCGA AGGGGCAGGA TAAGCCATAC TTCGATAGGA ACGGTGTGAT CTGGTTCAAA
AACGGGGCCG ACAAACGGCG GGTGAACTCC AGGGAGGAAC TCCGCCGCCT CTTCCAGAGC
GTCGATATCT TCCATGCCGA CGAACTGCCG ACCAGAGCAG GCGTCGACAA ACTGGACAGT
CTGCGCTTCC GGGACTTTCT GCGGAACGCC TATAATCAAC CTTACCCGGA TTCGTCTGAA
GAACTGCTAA CGCTCCTGCA GAACATGAAC CTTGCCGCGG ATAACGGCAT GCTGAATCTG
GCCGGGGCGC TCCTCTTTGC TGAGAAGCCC GAGTGGATCA AACCGCAGTT CGTCATCAAG
GCTATCCGCT ATCCCGGCAA CGCCATTCAC GTAAGCGAGT ATCTCGACAG CGAGGATTTC
TCCGGGACGC TCCCTGAGGT CTTCGAAGGT GCCATGGCGT TTATCATGCG CAACCTCAGG
AAAACTCAGG CAGGCAAGGG AATCAATGCA CCAGGGGTTC CAGAAATTCC GCCGGTTGTC
TTTGAGGAAC TGCTGGTCAA TGCCCTGGTG CATCGGGACT ATCTGGTCAG CGCACCTATC
CGGCTGTTCG TCTTCGACAA CCGCATCGAG ATTATTAGCC CTGGCCACCT CCCGAACAAT
CTGACGGTGG CAAAAATCCG GGCTGGTAAC TCCAATATCA GGAATCCGAT CTTGGCATCG
TACGTCGCAA AGGGGCTGCT GCCATACCGC GGCCTCGGCT CCGGCATCAA ACGGGCACTC
GAAGACTGGC CTGAGATCGA CTTTGCCGAT GACCGGGACG GCTGCCTTTT CACCGTCACA
GTTCACCGAA AGGAGGAGAA AAGTTCGGAG AAAAGTTCGG AGAAAAGTTC GGAGAAAATC
CTCGCGCTCC TGAAGGCCGA ACCCGACCTT GCAGCAAGAG TAGTCGCAGA AAGGCTGGGA
ATCACGCAGA GAGCAGTTGA AAAGCAGATC GCCAAACTTC GTGAAGATGG TCGGCTCCGC
CGCATCGGCC CTGCCCGGGG CGGTCACTGG GAGGTTCGGG AATGA
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| Protein sequence | MIPDILRALI ATGEDSRRQF KRDVTNADAL AAEMAAFANA EGGTLFLGVA DDGSVLGLSR
TDVNRLNQLI SNAASQHVKS PLTVQTENVQ VDEDRIVIVL TVPKGQDKPY FDRNGVIWFK
NGADKRRVNS REELRRLFQS VDIFHADELP TRAGVDKLDS LRFRDFLRNA YNQPYPDSSE
ELLTLLQNMN LAADNGMLNL AGALLFAEKP EWIKPQFVIK AIRYPGNAIH VSEYLDSEDF
SGTLPEVFEG AMAFIMRNLR KTQAGKGINA PGVPEIPPVV FEELLVNALV HRDYLVSAPI
RLFVFDNRIE IISPGHLPNN LTVAKIRAGN SNIRNPILAS YVAKGLLPYR GLGSGIKRAL
EDWPEIDFAD DRDGCLFTVT VHRKEEKSSE KSSEKSSEKI LALLKAEPDL AARVVAERLG
ITQRAVEKQI AKLREDGRLR RIGPARGGHW EVRE
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