| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0853 |
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| Symbol | |
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| ID | 4848445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 830626 |
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| End bp | 831855 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640115538 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_001046768 |
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| Protein GI | 126178803 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0173976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGAC TCGAGACCGG TGACCTGGTG CGGTACGCAA ACGGCGGAAC CGCGCTCACC
GGCACCTACA TCGCCGAACG GGACGGTATG GCCGTCGTCA AACTGGAGAG CGGCTACAAC
ATCGGAACGT CGCTTGAGAA GATCGAGTTC ATCGAGCGCC CGGCCCGGCA CCCGCCGGCA
GGCGCGGGTG TCGTCGTCCA GAACCCCGAC CTCCCGGAAC TCTCCATCAT ATCCACCGGC
GGGACGATCG CAAGCCGGGT GGACTACCGG ACCGGTGCGG TGATGAGCCA GTTCTCGGCG
AGCGATATCC TGCGGGCGAT CCCGGAACTC GGGGATATCG CCCGCTACCG CGACCGCCAG
ATCGCGAGCA TCCTCTCGGA GAACATGCAG CCGGCGCTCT GGCGGGAACT CGCCCGGGCG
ATTTACGACG AGATCCGGGC CGGCGTTGCC GGGGTGATCG TCACCCACGG CACCGACACG
ATGGCCTACT CGGCGGCGGC GGTCAGGTTC ATGCTCAAGA CCCCGGTGCC GGTCGTCTTC
GTCGGGTCGC AACGGTCCGC CGACCGCCCG AGTTCCGACA ACGCCATGAA CGCCCTCTGC
AGCGCCGCCG TCGCCGCCGG CGACCTCGGC GAGGTGGTGG TGGCGATGCA CGCGACGACG
AACGATGACC GGTGCGCCGT CCACCGTGCC ACAAGGGTCC GTAAAATGCA CACCTCCCGG
CGCGACGCCT TCCAGAGCAC AGGCATGGAG CCGCTCGGCT ACGTCGACTA TCCCTCGCTC
TCCGTCACCC TCTCGGACGA GGCGGTCCGG CGGGGAACCG AAGAGCCGGA ACTCCACGAT
AACCTCGAGG AGCGCTGCGC CCTTCTCCAC TTCTACCCCG GGATGCCCGC CGCGGTCCTC
GACGCCTACG AGGGCTATAA GGGCCTGGTC ATATCGGGGA CAGGGCTCGG GCACGTGGCG
ACGGCGTGGA TCCCGAAACT CCGGGAGATG ATCGAGAGCG GGACGACCGT CGTCATGACC
TCGCAGTGCC TGCACGGCCG GGTCTGCGAC CGGGTCTACA ACACGGGAAG GGACCTGCTA
TCCGCCGGCG TCATCGAGGG CGAGGATATG CTCCCCGAAG CGGCGCTCGT CAAATTGATG
TGGGTGCTCG GGAACGAGCC GGACCCCGAA CGGGCAGGGG TGCTGATGCA GACCGATCTT
GCTGGCGAGA TCCGGCGGAG GTCGATATGA
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| Protein sequence | MERLETGDLV RYANGGTALT GTYIAERDGM AVVKLESGYN IGTSLEKIEF IERPARHPPA
GAGVVVQNPD LPELSIISTG GTIASRVDYR TGAVMSQFSA SDILRAIPEL GDIARYRDRQ
IASILSENMQ PALWRELARA IYDEIRAGVA GVIVTHGTDT MAYSAAAVRF MLKTPVPVVF
VGSQRSADRP SSDNAMNALC SAAVAAGDLG EVVVAMHATT NDDRCAVHRA TRVRKMHTSR
RDAFQSTGME PLGYVDYPSL SVTLSDEAVR RGTEEPELHD NLEERCALLH FYPGMPAAVL
DAYEGYKGLV ISGTGLGHVA TAWIPKLREM IESGTTVVMT SQCLHGRVCD RVYNTGRDLL
SAGVIEGEDM LPEAALVKLM WVLGNEPDPE RAGVLMQTDL AGEIRRRSI
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