| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0794 |
|---|
| Symbol | |
|---|
| ID | 4845997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 775128 |
|---|
| End bp | 776354 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640115478 |
|---|
| Product | WD-40 repeat-containing protein |
|---|
| Protein accession | YP_001046709 |
|---|
| Protein GI | 126178744 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGG GGGAAGTGAC TTCATCCAGT TCTACCGTTA GGGTCCGGGC TTGTTCCGGG
CTTGTGGATT CCGGGCGTAT CAAGAGGGTG CTCCTTCTGT TATGCTGCCT TACCGCTGCC
CTGTGTGGGG TTGCCTCCGC GGACGAGGGG GGGGAGTATG TTCCGGTCTG GGGGCAGGGG
GCCAACGGCC CCGTCAGTTC CGTGGCGGTC ACGCACGACG GTTCCATGAT CGTCGCCTCT
GCAGGTTCGG TGGTCTACGT TCTTGACCAG CAGGGAAATG TTCTCTGGGA GAGCCCCGCC
GGTTCGCGGG TGAACAGTGT CGGGATATCG CCCGAAGGGT CGCGGATAGG CGTTGCTGCA
GACAAGCTCT ATCTCTACGA CGGGGACGGA GACCTGCTCT GGACCGAGAA GACGGGTTTT
GTCTACCGGA GCGTGGATCT CTCATCGAAC GGCACGTATG TCGCCGCCGG CTGCGACAAC
GGCGCGGTCT ACATCTTTGA TCGGAACAAG AAGCAACTCT GGGATTACGA TATGGGGACC
GACAGCTACG ATCTCGCGAT ATCGAAGAAC GGCCGCAGGA TCGCGATCGG CTGCGATAAC
CAGGGGGTCT ATCTCCTCAA CAGCAGGGAG GGAGAGTCCT GGAGTTACGG AACCGGCAAA
CTGGTGAGGG GGATTGACCT CACCCCCGAC GGGCGGTTCG TGGCGGCCGG ATCGGTCGAC
CGGTGCCTCT ATCTCTCCAC GGGGGAGGGG GAGCACCTCT GGAAATATCC CGTGGGGGAT
GCCGTCATCT CAACGGCCCT GACGAACGAG GCTAAGAGGA TCTTCGCTGC ATCCGGCAGG
ACAATCTACG TCTTCGACCG CACGGGAACC GAGGTCCAGA AGATCGCCCT CAAGGGCCGT
GCGGAGTCCG TCGCCGTGAC CCCCGACGGT TCGTTCCTCG TCGTCGGGGG CGGCGAGGGC
GATCGGTCGA TCCGTCTCTT CACAAACGAT CCGGACCTGG TCGAGACCTG GAATCCGCCG
GAGGCTGTGA TCAACGAGAC CGAACCGTCG GAAAACACGA CGACCGGCGT GACGGTCCCC
CCGACCCCCG AGGACACTGG CACGGATACA GCGGCGGGAG TGAGCGCCGA TGCCCGAGAG
GAGGTCCCGA TAACCTCAAG GGTGGTTGGG TGGGTGGAGA ACATCCTCTC CCTTCTCTTT
GAACCCCGGG ATGATTTCCT GGCCTGA
|
|---|
| Protein sequence | MSSGEVTSSS STVRVRACSG LVDSGRIKRV LLLLCCLTAA LCGVASADEG GEYVPVWGQG
ANGPVSSVAV THDGSMIVAS AGSVVYVLDQ QGNVLWESPA GSRVNSVGIS PEGSRIGVAA
DKLYLYDGDG DLLWTEKTGF VYRSVDLSSN GTYVAAGCDN GAVYIFDRNK KQLWDYDMGT
DSYDLAISKN GRRIAIGCDN QGVYLLNSRE GESWSYGTGK LVRGIDLTPD GRFVAAGSVD
RCLYLSTGEG EHLWKYPVGD AVISTALTNE AKRIFAASGR TIYVFDRTGT EVQKIALKGR
AESVAVTPDG SFLVVGGGEG DRSIRLFTND PDLVETWNPP EAVINETEPS ENTTTGVTVP
PTPEDTGTDT AAGVSADARE EVPITSRVVG WVENILSLLF EPRDDFLA
|
|---|
| |