| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0768 |
|---|
| Symbol | |
|---|
| ID | 4846008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 747665 |
|---|
| End bp | 748363 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640115452 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001046683 |
|---|
| Protein GI | 126178718 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0565] rRNA methylase |
|---|
| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00615258 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGA TCTCAATCGT CCTGATCGAG CCCCTCTACG AGGGGAACGT CGGGTTTACC
GCACGGGTGA TGAAGAACTT CGGGTTCACC CGGCTGGTTC TCGTCAACCC CTGCACGCTC
GGCGACGACG CGATCATGCG CGCCTCCCAC GCCCGCGACG TTCTCGAGGA CGCCCGGCGG
ATGACGATCA AGAAGGTCTA TAACGAGTTC GACTTCGTGG TCGCGACGAC CGGGGAGGTG
AGCAAGTCGG TCTGCACCCC GATGCGGATG CCCTACTACG CACCGGCGGA GGTCAGGGAG
ATCGTCGGCG ATATCGACGG GACGGTCGCG ATCCTCTTCG GGCGGGAGAA CTGGGGGCTC
GCGAACACCG AACTCGCGCG CGCAAACCTC ATCTGCACCA TCCCGACCTC GGAGATCTAC
CCGATCCTCA ACCTCTCCCA CGCGGTGGGC ATCCTCTGCT ACGAGCTCGC GAACCTGCCG
CGGGGGACCT ATCCCCTCGC GAGCCCCGTC GAGATGGATT CGCTCTACCG GCACATCGAC
GCGTTCCTGA ACCGTATCGA CCACCCGGAC TTCAAGCGGG AGAACACGAT GACCCTGATC
CGCCGGGTGC TCGGCCGGAC GAAACTGACC ATCCGCGAGG CGAGCACGCT TCACGGGCTG
ATGCGCCGGA CGGAGTGGCA TCTCGAAAAC AAAGAATAG
|
|---|
| Protein sequence | MPEISIVLIE PLYEGNVGFT ARVMKNFGFT RLVLVNPCTL GDDAIMRASH ARDVLEDARR
MTIKKVYNEF DFVVATTGEV SKSVCTPMRM PYYAPAEVRE IVGDIDGTVA ILFGRENWGL
ANTELARANL ICTIPTSEIY PILNLSHAVG ILCYELANLP RGTYPLASPV EMDSLYRHID
AFLNRIDHPD FKRENTMTLI RRVLGRTKLT IREASTLHGL MRRTEWHLEN KE
|
|---|
| |