| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0700 |
|---|
| Symbol | |
|---|
| ID | 4847651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 680989 |
|---|
| End bp | 681918 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640115383 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001046615 |
|---|
| Protein GI | 126178650 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.182018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACA TTGTCACAGG TGGAGCGGGG TTCATCGGGT CCAACCTCAC GGCGACACTG
GCACGCGACC ACGAGGTCGT AATCATCGAC AACCTCGCCA CCGGTCACCA GGAAAACATC
GAGCACCTCC TCGGTCACCC CCGGGTGACG TTCGTCGAGG GGAGCATCAC CGATCTCGAC
CTTCTCGCGG AAACCTTCCC CGGCGCGGAC GGTGTCTTCC ACCAGGCGGC CATCCCGTCC
GTGCCCCGGT CGGTGAAGGA TCCGCTCGCC TCGAACGAGG CGAACGTGAC CGGCACGCTC
GACGTGCTCG TGGCGGCGAA GGACTGCGGA GTGCCGGCCG TGGTTGCCGC CTCCTCCTCC
TCGGTCTACG GCGACACCCC GGCCCTCCCG AAGCACGAGG GCATGGTCCC GAACCCGCTC
TCCCCCTATG CGGTCACGAA ACTGGCGGAC GAGTGCTACG GGAAGGTCTT CTCGGATCTC
TACGGCATCC GCACCGTCTC CCTCCGCTAC TTCAATGTCT TCGGCCCACG GCAGGACCCC
AAATCCGAGT ATGCAGCGGT GATCCCGAAG TTCATTACCC GGCTGCTTGC CGGCGAACCG
CCGGTCATCT ACGGCGACGG GGAGCAGACC CGCGACTTCA CCTTCGTCGC CGACGTGGTG
CAGGCGAACA TCAGAGCGAT GGAGAGCGAC GCCAGAGGGG TCTTTAACAT CGCAGGCGGC
CGCCGGATCA GTTTGAACCA GCTTGCGTCC ATCCTCATGG AGATCACAGG CACGCGGTGC
GACCCGATCT ACGAGGCCCC CCGTGCCGGG GATATCCGGG ACTCGCTCGC TGACATCAGC
CGCGCCCGGA AGGCGTTCGG GTACGACCCG CAGTATTCCG TCGAGGAGGG GCTCTTTCAG
GCAGTGGCGT GGTTCCGGGA GCGAGTTTGA
|
|---|
| Protein sequence | MRYIVTGGAG FIGSNLTATL ARDHEVVIID NLATGHQENI EHLLGHPRVT FVEGSITDLD
LLAETFPGAD GVFHQAAIPS VPRSVKDPLA SNEANVTGTL DVLVAAKDCG VPAVVAASSS
SVYGDTPALP KHEGMVPNPL SPYAVTKLAD ECYGKVFSDL YGIRTVSLRY FNVFGPRQDP
KSEYAAVIPK FITRLLAGEP PVIYGDGEQT RDFTFVADVV QANIRAMESD ARGVFNIAGG
RRISLNQLAS ILMEITGTRC DPIYEAPRAG DIRDSLADIS RARKAFGYDP QYSVEEGLFQ
AVAWFRERV
|
|---|
| |