| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0667 |
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| Symbol | |
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| ID | 4847645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 636724 |
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| End bp | 637728 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640115349 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001046582 |
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| Protein GI | 126178617 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.15929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGG ATGACCTATA CTCCCTGCTC GCCCGCTTTG AAGGGCGGCA GATCGACTTC
AAGGAAGATG TGAGCGCAAG CCTTTACCGG CTCCTGTCCG CCTTCGCCAA CACCGCCGGT
GGTGCCGCCG TCATCGGAAT CCGGGACCAT GACCATGCCG TCATCGGGCT CGACCTGAGG
AATAACGCTG TTAAGAAACT CGCGGACAGC ATAACCACCC GGCTCGGCGT TCATCCGGTC
ATCGATATCC ATGAGATCGA GGGGAAGTCC ATCGTCATCG TCACTGTCGA GCGGAGCCGC
GTTCCGGTCG CCTTTGACGG GCGGTACTAC ACCCGTGTCG GCGATACAAC CCGCGAGATG
CTCCCCGACG AGCTCAGGGA GTACTTCCAG CAGAGCATTG AGTGGGACAG CGTCACCGGG
CCGTACTCGT TCGATGAGAT CGACGAAGAG ACGGTGCGGC GTTTCCTTGC ACGGGCAAAT
GCGACGGGCC GACTCACTTC TGTCGATCCG GCCGAATCAG TAGAGACAGT GCTCTCTCGA
CTCGGGCTTG CCAGGGACGG AGGGATCAGC AACGGCGCCA TCGCCCTCTT CGGCAAGAAC
CCGCAGCGGT ATTTCTTGAA CTGCATCCTC CGGATCGGGC GGTTCAAGCG GGCGGATATC
ATCATCGGCG ACCACGAGAT CGGGGGCAAT CTCTTCCAGC AGTTCGAGGA GGGCGAGCGG
ATTATCAAGC AGTATCTCGG CGTCAGGTAC GACATCTCAG AGGAGGCGAT GCGAGAGTCC
TTCCAGAGGA GAGAGATCTG GGACTACCCG CTTTTGGCGA TCCGGGAGGC GCTTCTCAAC
GCGCTTATCC ACCGCGATTA CTTCAACAAC ACGATCCAGA CGCAGGTCAA GATCTTTGAC
GACCATATCC GCTTTCACAA TCCCGGCCAT CTTCCCGAAG GTGTCACCGT TGAGATGATC
ATACAGGAGN CACTACTCCT TTCACCGCAA CCCGAAGGTT GCTGA
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| Protein sequence | MRVDDLYSLL ARFEGRQIDF KEDVSASLYR LLSAFANTAG GAAVIGIRDH DHAVIGLDLR
NNAVKKLADS ITTRLGVHPV IDIHEIEGKS IVIVTVERSR VPVAFDGRYY TRVGDTTREM
LPDELREYFQ QSIEWDSVTG PYSFDEIDEE TVRRFLARAN ATGRLTSVDP AESVETVLSR
LGLARDGGIS NGAIALFGKN PQRYFLNCIL RIGRFKRADI IIGDHEIGGN LFQQFEEGER
IIKQYLGVRY DISEEAMRES FQRREIWDYP LLAIREALLN ALIHRDYFNN TIQTQVKIFD
DHIRFHNPGH LPEGVTVEMI IQEXLLLSPQ PEGC
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