| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0655 |
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| Symbol | |
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| ID | 4846652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 627717 |
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| End bp | 629708 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115337 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001046570 |
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| Protein GI | 126178605 |
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| COG category | [H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.24382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGACG AGGTCCACAC CGACGAGCCT CCCGATAGCA GACGCAAGGG AAGACACCGG
GACAGGAGGA CGATCGGTCC GGTCCCGAAC CTTGAAGACC ACGTAAAACC CGACTGGTGG
AGGGGCATCT TCAATCGCCT TTACCTGAAG ACCGACGGCG ACGTCGTCGA CGACCCCCGG
ATCACCGGGA GAGAGATCGA CCGGATCGCC CGGGTTCTGC ACCTCCAGCC CCACGAAAAA
GTCCTCGACC TCTGTTGCGG CCAGGGCAGG CACACCCTCG AACTCGCGCG CAGGGGCTAC
AACGCCGAAG GCCTCGACCA GTCGCACTAC CTAATCCAGC GGGCCCGGTC GACCGCGAAG
AAAGAGGGGC TCCCCGTCAG GTTCAGGGAG GGGGACGCCC GGCGACTCCC GTACCGCACC
GACACCTACG ACGTCGTCCT CGTCCTCGGG AACAGTTTCG GCTATTTCGA CTCCGTCGAG
GAGGATCTCC GGATCCTCAC CGAGATCCGG CGCATCCTCA AACCCTGGGG GCGGGTGCTC
CTGGACGTCG CCGACGGCGA GTACTTAAAA GAGCACTTCC AGCCGAGGTC GTGGGAGTGG
ATCGACGATA CCATGTTCGT CTGCCGCGAG AGGTCGCTCT CGTTCGACGA CCAGCGCCTG
ATATCCCGTG AGGTGATAAC CGACGTCGAG AAGGGCGTCG TGGCCGACCA GTTCTACGCC
GAGCACCTCT ACACCCCCGA GGCGCTCCGG CGGCTCCTTG AGAAGGCGGG GTTCTCCGGC
ATCGCCTTCC ACGAGATCGC GACCGAGTCG CAGCGCAACC AGGACCTCGG GATGATGGAG
CGCCGCCACA TCGTTACCGC GCACGTCAGG AAGGAATGGT CGGCGACGAA GACAAAAGGC
CGGGAGACGG CAAAACACGT CGCGGTGCTC CTCGGCGACC CGGCGAGGCC CGACGCCCTG
AAACCCTCCT GCGCCTTCGA CGACGACGAC TTCTACACCA TCGACCAGAT GAAGGCGGCG
CTGCGGGAAC TCTCCGGCTA CCGGTTCACC TACCTCTTCA AGCACGAGAC GCTGATCCAG
GATCTCCAGA GACTGAAGGG GAAGGTGGAC TACGTCTTCA ACCTCTGCGA CGAGGGGTTC
AACAACGACC CGAGGAAAGA ACTCCACGTC CCGGCGCTTT TCGAGATTTA CAGCATCCCG
TACACGGGAG CCGGCCCGCA GGCGCTCGCG TTCTGCTACG ACAAATCGCT CGTGCGGGGG
ATCGCAAAAG AGATGGGGAT CCCGGTGCCG GACGCCTGCT TCATCACCCC CGGCGACCGC
ACTTACGATG TCGGGATGAA GTTCCCGGCG ATCGTCAAGC CGAACGCAGG CGACTCCTCC
TACGGCATCA CGCAAGAGAG CATCGCCCAC TCCATCGAGG AACTCTCCGA CATCATCACC
TCGCTCCGGA CGACCCTCGG CTACGACCGC TCGCTCCTCG TCGAGGAGTT CCTCACGGGA
AAAGACATCA GCGTCGGGAT CATCGGGAAC CCGTCGGGAT ACAGCATGGT GCTGCCCGTC
ATCGAGGAGG ACTACTCCGC CCTGCCCCCG GGTCTCCCCC GCATCTGCGG CTACGAGGCG
AAGTGGCTCC CGGACTCGCC CTACTGGAAG ATCACCTCAA AGCCCGCGGA CCTCCCCGAG
GAGACCGAGA AGGCGATCGT GCGGTGCTGC CTCGCCCTCT TCGAACGCCT GGAGTGCCGC
GACTACTGCC GGTTCGACTG GCGGCTCGAC GAGCACGGCA ACCCAAAACT CCTCGAGGTC
AACCCGAACC CCGGCTGGTG CTGGGACGGC CACCTCGCCA GGATGGCGAA GTACGCGGGC
CTGACGTACC CCGAGATGCT CGGCCGGATC CTGAAAGCTG CGGAGGAGCG GTTCGGGATG
GAGCCGGAGC GGGATACGCG GGAGGCCGGC AAGGAACATC TCCCGTTCGA CCTCAGCCAG
GAGACGGCCT GA
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| Protein sequence | MIDEVHTDEP PDSRRKGRHR DRRTIGPVPN LEDHVKPDWW RGIFNRLYLK TDGDVVDDPR
ITGREIDRIA RVLHLQPHEK VLDLCCGQGR HTLELARRGY NAEGLDQSHY LIQRARSTAK
KEGLPVRFRE GDARRLPYRT DTYDVVLVLG NSFGYFDSVE EDLRILTEIR RILKPWGRVL
LDVADGEYLK EHFQPRSWEW IDDTMFVCRE RSLSFDDQRL ISREVITDVE KGVVADQFYA
EHLYTPEALR RLLEKAGFSG IAFHEIATES QRNQDLGMME RRHIVTAHVR KEWSATKTKG
RETAKHVAVL LGDPARPDAL KPSCAFDDDD FYTIDQMKAA LRELSGYRFT YLFKHETLIQ
DLQRLKGKVD YVFNLCDEGF NNDPRKELHV PALFEIYSIP YTGAGPQALA FCYDKSLVRG
IAKEMGIPVP DACFITPGDR TYDVGMKFPA IVKPNAGDSS YGITQESIAH SIEELSDIIT
SLRTTLGYDR SLLVEEFLTG KDISVGIIGN PSGYSMVLPV IEEDYSALPP GLPRICGYEA
KWLPDSPYWK ITSKPADLPE ETEKAIVRCC LALFERLECR DYCRFDWRLD EHGNPKLLEV
NPNPGWCWDG HLARMAKYAG LTYPEMLGRI LKAAEERFGM EPERDTREAG KEHLPFDLSQ
ETA
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