| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0634 |
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| Symbol | |
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| ID | 4847425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 605507 |
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| End bp | 606718 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640115316 |
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| Product | 3-isopropylmalate dehydratase |
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| Protein accession | YP_001046549 |
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| Protein GI | 126178584 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0544933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACGC TCTCCGAAGC GATCCTCGGC GCGCCGGCGG GGGAATACGT GGATCGAGAG
GTCGATATAG CCTTTGCCCA CGACGGAACC GGCGTCCTCG CCCGGGAAGC GCTCCGGGAG
ATGGGGGTGG AGCGGCTCCC GCATCCCGAG CGGCTACGGC TGGTCTTCGA TCATATCGTC
CCGGCGAACA CCGGGACGAC GGCGACGCTC CAGGCCGAGC TCCGCGAGTA TGCCGGGGTG
TCGGGGATCG CGCTCTCGGA TGCCGGCGGG GGGATCTGCC ACCAGGTGAT GGGCGAAGGG
GTCGTCCGGC CCGGCATGGT CGTCGTCGGC GCCGACTCCC ATACCTGCAC CCTCGGCGCC
TTCGGCGCGT TCGCCACCGG GGTAGGGGCG ACCGATATGG CGGCGATCTG GGCTTCGGGG
GAGACGTGGT TCCGCGTCCC GGAGACGATC GCGGTCAACC TCTCCGGCAG GCTCTCCGGC
GCTGCGGAGC CTAAAGACGT CGCTCTCGCC TACGTCGCGG AACTCGGGAT GGAAGGGGCG
ACCTACCGGG CGCTGGAGTT CGTGGGCGAC GGGGCGGCAG GAATATCCAT GGACGGGCGG
CTGACCCTCT CGAACATGGC GGTCGAGACC GGGGCGAAGA CGGGCATGTT CTACGCCGAC
GCGGTCACCG TCCGCTACCT CGCGGACTAC GGGGTTACGG CCTCGCCGCA GGCGCCGGAG
GACTGCCGCT ACGAACGGAC GGTCGAGATC GATCTCGACG ATATCGTGCC TCTCGTCGCG
GTCCCGCACC GGGTGGATAC CGTCCGCGAG GCCGAAGAGG TCGCGGGCAC GCACCTCGAC
CAGGTCTTTG TCGGAACCTG CACGAACGGC CGCTACGAGG ACCTTGCCCG GTTCGCCCGG
ATCGTCCGGG GAAAGAAGGT GGCCGTGCGA ACCCTGGTGT TTCCCGCATC CCGTTCGGTG
CTTGCCCGGG CAATCGCCAC CGGCGTCCTC GCCGATATCG TGGATGCGGG CTGCGTCGTC
GGGTCGCCCG GGTGCGGGCC GTGTCTCGGG GCGCACGCCG GGGTGATCGG GGAGGGGGAG
GTCTGCCTCT CCACCGCCAA CCGGAACTTC AAGAACCGGA TGGGCGTGGG CGGCGAGATC
TACCTCTCGT CGGTCGCCAC CGCCGCAGCG AGCGCGATTA CCGGTGTCAT AACCGTGCCG
GAGGTGGTAT GA
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| Protein sequence | MSTLSEAILG APAGEYVDRE VDIAFAHDGT GVLAREALRE MGVERLPHPE RLRLVFDHIV
PANTGTTATL QAELREYAGV SGIALSDAGG GICHQVMGEG VVRPGMVVVG ADSHTCTLGA
FGAFATGVGA TDMAAIWASG ETWFRVPETI AVNLSGRLSG AAEPKDVALA YVAELGMEGA
TYRALEFVGD GAAGISMDGR LTLSNMAVET GAKTGMFYAD AVTVRYLADY GVTASPQAPE
DCRYERTVEI DLDDIVPLVA VPHRVDTVRE AEEVAGTHLD QVFVGTCTNG RYEDLARFAR
IVRGKKVAVR TLVFPASRSV LARAIATGVL ADIVDAGCVV GSPGCGPCLG AHAGVIGEGE
VCLSTANRNF KNRMGVGGEI YLSSVATAAA SAITGVITVP EVV
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