| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0549 |
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| Symbol | |
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| ID | 4846076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 528558 |
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| End bp | 529283 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640115230 |
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| Product | thymidylate synthase |
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| Protein accession | YP_001046464 |
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| Protein GI | 126178499 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0207] Thymidylate synthase |
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| TIGRFAM ID | [TIGR03283] thymidylate synthase, methanogen type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000344627 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGATCA TTCGGGCCCC CACGCTCGCA CGGGCACACG AACTGGCGGT CAGGACCGTC
CTCGAGAAAG GATGGGTGCT GGATACGGAG AACGACGAGG CGACGATCGA GTGCGAGGAA
CTCGCGCTCG AGGTGGAGTC GCCGGAAAGC GTTCCCATGG CGAGCCCCGC CTCCCGGTTC
CAGCAGCGGT TCCTGGACGT CTACGCCGAC AACCTCCTGC ACGGCTCCGA CGCGAAGTTC
GAGTACGACT ACCACCGCCG GCTCTTCGAC TGGGGGGAAC AACTTATGGT GAACGGCGAG
GACGTCCACG TCGACCAGAT CGACTACATC GCCCGGAAAC TCGAGCAAGC CGCGAACTCG
CGGCGGGCGG TCGCGGTCAC CTGGAACCCG GTCGTCGACG AGAACCTCGA CGACTGCCCC
TGCCTGCAGC TCGTCCAGTG CCTGCTGCGG AACGGGAAAC TCCAGATGAA GGTCGTCTTC
AGGAGCAACG ACATCCTCTC CGCCGCCGGC TCCAACATGT ACGCGCTCGT CCGCCTCCAG
AAGATGATCG CGGACCGGCT CGGCGTGCCC TGCGGGCGCT ACACGCATAT CGCGCTCGTC
CCCCACATCT ACTACCGCCG GGATCTCAAC GATATCGAGC CGTTTTGCAA ATCAGGCACC
GAGATCAGGC CGGTTGCCGA GGTCTGCCGG GCCTGCGGGA AGTGCCCGCG CTCATCCGGG
GCATAA
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| Protein sequence | MRIIRAPTLA RAHELAVRTV LEKGWVLDTE NDEATIECEE LALEVESPES VPMASPASRF
QQRFLDVYAD NLLHGSDAKF EYDYHRRLFD WGEQLMVNGE DVHVDQIDYI ARKLEQAANS
RRAVAVTWNP VVDENLDDCP CLQLVQCLLR NGKLQMKVVF RSNDILSAAG SNMYALVRLQ
KMIADRLGVP CGRYTHIALV PHIYYRRDLN DIEPFCKSGT EIRPVAEVCR ACGKCPRSSG
A
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