| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0541 |
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| Symbol | |
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| ID | 4847313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 523601 |
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| End bp | 524461 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640115221 |
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| Product | Pre-mRNA processing ribonucleoprotein, binding region |
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| Protein accession | YP_001046456 |
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| Protein GI | 126178491 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0672918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAGC GCTACTGGTT CGGGGACGTC GACGAGGAGG GGTGCCGGGC CGCCGGCACC
GATCCGGCCG CGCTCGCGGA GCGGGCGGCC ACGCTCCGCA CCGGTATGGA TTCCTTTGTT
CCCATCGACT GGGAGGTTGC CCGGGACTGC GGGGTCGTCC GGACGCGGGC GGAGTACGTC
GACCTGCTCC GGTCGGTCTG CACCACCCTT GCCCGGAAAA AGATCGCCCA ATCGTACCAG
GGCCGGGACG TCGAGCTCCT CCAGATGGTG AGGATGCTCG ACGAGCTCGA CAACGTCATC
AACCTTCTCC AGGAGCGTGC CGCGGAGTGG TACCAGGTCA CGAACCCCTC GTTCTCCCGG
AAGTATCGCT CCCTCCCGGC GAAGAAGATG CTCGGGATCA TCCGGAAGGG GGCGAGAGGA
GGTCTCTCGG ACGTCGCCGA CGAGATCGAC CGGCTCGCCG GGACGAGGAG CCGCCTGATG
CGGGAGGTCT CGGCCCGTGC CGACGAGGTG ATGCCGAATA CGAGCGCCCT CATCGGCGGG
CTGGTCGCGG CCCGGCTCCT CTCCAAAGCA GGGGGGCTTC CTGCGCTCGC GAGGATGCCG
GGGAGCACCA TCCAGGTTAT CGGCTCGGAA CGGGCCCTCT TCTCGCACCT CAGGGGCGGG
ACGCCGCCGC CCAAGCACGG GATCATCTTC CAGCACCGGC GGGTCCACAA CGCGCCGAGA
CCGGTGCGGG GACGGGTGGC CCGGGTGCTC GCGGCGAAAC TCGCCATCGC CGCCCGGCTC
GACTACTACC GGGGCGAGGC GGTGCCGGAG TTCCTCAAAG ACGCCCAGGC GCGGATCGAC
GAGGCGGGGG TCGAGGCATG A
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| Protein sequence | MLQRYWFGDV DEEGCRAAGT DPAALAERAA TLRTGMDSFV PIDWEVARDC GVVRTRAEYV
DLLRSVCTTL ARKKIAQSYQ GRDVELLQMV RMLDELDNVI NLLQERAAEW YQVTNPSFSR
KYRSLPAKKM LGIIRKGARG GLSDVADEID RLAGTRSRLM REVSARADEV MPNTSALIGG
LVAARLLSKA GGLPALARMP GSTIQVIGSE RALFSHLRGG TPPPKHGIIF QHRRVHNAPR
PVRGRVARVL AAKLAIAARL DYYRGEAVPE FLKDAQARID EAGVEA
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