| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0456 |
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| Symbol | |
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| ID | 4846449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 441853 |
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| End bp | 444111 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115133 |
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| Product | HAE1 family efflux transporter |
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| Protein accession | YP_001046371 |
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| Protein GI | 126178406 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00921] The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.857513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACC CCTACGAGTG GCTCGCTGCC GCCATCAACA ACCATACCTG GACCGTCGCC
GGGGTCGCCG CGGCTATCTT CATTGTGGCT TGCTTCGGGC TCTCGATGGT CTCGATGGAG
ACCAGCGACG ACGCCTACCT CGACAAGAGC ACGCCCCGCG GCGCGCTCCT GAACCACTAC
GCCGAGACCT ACGGCTCCGA CGCGATCATG CTCATCTACG AGACGGACAG CGTCCGGAGT
CCCGAGATCC TCAGGTATAT CGACCATCTC CAGGAAGACC TCAGGAACGA GCGCTACGTC
GACGAGGTCT CCGGCGTCGT CGACCTCCTG AAACAGGCGA ACGGCGGCAC CCTGCCGTCG
TCCACAGCGG AGATCGACGC TATCATCGGA CAGGCTCCGC CGGAGATGGT GGAGAGGATG
CTGCCCTCGG ATCTGATGAC GATCAGCGTC ATCGCCCTCG AGCCCGGCGT CACCATGGAG
GCGCAGCAGC AGGTTGTCGG GAACATCAAA TCCATCATCG CCATATCGGA GCCCCCGCCG
GGGCTCACGG TCACGGTATC CGGCAACCCC GCGTTCTCGC TGGAGATGGG CGAGGCGATG
GGATCCGAGA CAGGCATGCT GATCCTGGTG GCCATGGTCC TGATGGTCCT CGCGGTGACG
CTCCTCTTCT CCCACGTCCG CTACCGCCTG CTCCCGGTCG GGATCGTGGC CGTCGGGCTG
ATCATGACCT TCGGGTTCAT GGGCCTCTTC GGCATTCCCA TCAGCATGGT GGTGGTCGGA
GCGTTCCCGG TGCTGATCGG GATCGGAATC GATTACGCGA TCCAGCTCCA CGCCCGGTTC
GACGAGGAGA TCCGGCACGG CACGATCCCG GAGGCCGTAT GGGCCACCGT CACGCAGATG
GGGCCGTCGA TCCTGATCGC GATGTCGGCG ACGGCGCTCG GGTTCATCGC GATGTTCTTT
GCCCCGGTGC CGATGGTGGC CGACTTCGGG ATGGTCTGCA CCATCGGAGT CGTCTCCTGC
TATGTCGCGG CGCTCATCAT CGTCCCGGTC TTTGCAATCG TCACCCGCTA CCGGCCGATG
AAGGAGGCCG CAGCCGCCGG AACCGAACCG GCGGGCGGGG AATCCATCAT CGAGCGGTAT
GACCGCCTCC TCGGCAGGCT CGCCTACACC GTCGCGAAAT ACCCGATTCC CGTCATCCTG
ATCTTTGCGA CGGTCGCGGC AGGGGGCTTT TACCTCGACC AGAGCGTGCC CGTCAGTGCG
GACGAGAAGA CCTTCGTCCC CGGCGATATG CCCGCCCTTC TCTCCCTCGA GAAACTTACC
CGGGTCATGG GCTCGACGAG CACCATCCCG GTCGTCGTGC TCGCAGACGA CGTCCTCTCC
CCGGAGACGC TTGCCTGGAT AGATCAGTTC GGGGTCTACG AGCAGGAGCA TAACGACAAG
ATCACGGGCG TCACGAGTGT CGCGACCCTG ATCCGGGAGC ATAACGGCGG CGTGCTCCCC
TCGACCGAAA GGGAGGTCAA CAATATTATT GCCCGGATCC CGGAGGAGAC CCTCTCCCGT
TACCTCAACG GGAACCTGGA GGCGGTGCTC GAGTTCTCGA CGGTCGACAT GGAGATGAGT
GCCGCCCGCG ACCTCGTCGG GAGGATACAG GACGACGTTG CGTGGAACAA CCCGCCGGCC
GGGGTGACGG TGAAGATCAC CGGCCAGATG GAGATGTTTG CCGCCGTCAT GGACGATATC
AGCGAGTCCA GGGTGTATAT GACCGTGCTC GGGTTTGCCT TCATCCTCGG GTTCCTGATC
CTCGTCTACC GGAAGTTCGG CGCCGTCTCG CCGGTCATCC CGATCGTCTT CATCGTGGGC
TGGAACGGCG CGATCATGTA TCTCCTCGGT CTCGACTACA CGCCGCTGAC CGCCGTCCTC
GGGTCGATGA CGATCGGCGT CGCGTCCGAG TACACCATCC TGATCATGGA GCGGTGCGAG
GAGGAACTCA GCCGGGGCAC GGAGTTCCTC GACGCCGTCC AGACCGCCGT CCAGAAGATC
GGGACGGCTA TCACGGTCTC CGGGCTGACG ACGGTCTTCG GGTTCTCGGC GCTCACCTTC
TCGACGTTCA ACATCATCAG CAACTTCGGG ATCGTGACGG TCATATCGGT AGGGTTCTCG
CTCGTGGGCG CAATCGTCGT CATGCCGGCG ATCCTCGCGC TGATGTACCG CCTCAGCGGC
CGTTCCCGGG CCATAGCGGC GGCCGGGGTG ACGGAGTAA
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| Protein sequence | MKNPYEWLAA AINNHTWTVA GVAAAIFIVA CFGLSMVSME TSDDAYLDKS TPRGALLNHY
AETYGSDAIM LIYETDSVRS PEILRYIDHL QEDLRNERYV DEVSGVVDLL KQANGGTLPS
STAEIDAIIG QAPPEMVERM LPSDLMTISV IALEPGVTME AQQQVVGNIK SIIAISEPPP
GLTVTVSGNP AFSLEMGEAM GSETGMLILV AMVLMVLAVT LLFSHVRYRL LPVGIVAVGL
IMTFGFMGLF GIPISMVVVG AFPVLIGIGI DYAIQLHARF DEEIRHGTIP EAVWATVTQM
GPSILIAMSA TALGFIAMFF APVPMVADFG MVCTIGVVSC YVAALIIVPV FAIVTRYRPM
KEAAAAGTEP AGGESIIERY DRLLGRLAYT VAKYPIPVIL IFATVAAGGF YLDQSVPVSA
DEKTFVPGDM PALLSLEKLT RVMGSTSTIP VVVLADDVLS PETLAWIDQF GVYEQEHNDK
ITGVTSVATL IREHNGGVLP STEREVNNII ARIPEETLSR YLNGNLEAVL EFSTVDMEMS
AARDLVGRIQ DDVAWNNPPA GVTVKITGQM EMFAAVMDDI SESRVYMTVL GFAFILGFLI
LVYRKFGAVS PVIPIVFIVG WNGAIMYLLG LDYTPLTAVL GSMTIGVASE YTILIMERCE
EELSRGTEFL DAVQTAVQKI GTAITVSGLT TVFGFSALTF STFNIISNFG IVTVISVGFS
LVGAIVVMPA ILALMYRLSG RSRAIAAAGV TE
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