Gene Memar_0446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0446 
Symbol 
ID4846276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp429772 
End bp430437 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content65% 
IMG OID640115123 
Product5-amino-6-(5-phosphoribosylamino) uracil reductase 
Protein accessionYP_001046361 
Protein GI126178396 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCCTG AAGTCATCAT CCACAACACC GTGAGCCTCG ACCACGCGGT ACGGGGCTTC 
GAGATCGATC TCGGGCTGCA CTACGGCGCG CTCCTGGCCC TCGAACCGGG GGCGGTGCTC
GCGGGTTCGG CCACCGCAAG GTCCGGGATC GAACTCTTCA CGGACGTCAA CGAGACTGAA
ACGGAGGCGG ACCGGCACCG GCCCGAAGTC CGGCCGGACG ATCCGCGCCC CGTCTGCGTC
ATCGTCGACA GCAAGGGCAT ACTAAAAGAT CTGCTCCACT TCTACCGGAA CATGGAGCAC
ACGAAAGACG TCATTGTCCT CGTCTCGGAG GCGACGCCGG AAGACTACCT CGACTACCTC
CGCGAGCGGG AGTACCCGTT CATCCGGCGC GGCAAGGACC GGGTTGACCT CAAGGGCGCC
ATACGGGAAC TCGGGGAGCG GTTCGGGATC TCGCGGGTGG TCTCCGATAC CGGCCCGGAC
TTGAACGACG TCCTGATCCG GGAGGGGATC GCGGATACGA TCAGCCTGAT CGTCCATCCG
GTCGTCGTCG GCGAGGGGGA GAAGAAACTC TTCGGCCGGG CCGGGGGGCG GACGGCGCTC
GAACTCCGGA AGGCCGTACC GCTGGAGCAG GGGACGGTGC ACCTCGTCTA CGCGGTGAAG
AAATGA
 
Protein sequence
MYPEVIIHNT VSLDHAVRGF EIDLGLHYGA LLALEPGAVL AGSATARSGI ELFTDVNETE 
TEADRHRPEV RPDDPRPVCV IVDSKGILKD LLHFYRNMEH TKDVIVLVSE ATPEDYLDYL
REREYPFIRR GKDRVDLKGA IRELGERFGI SRVVSDTGPD LNDVLIREGI ADTISLIVHP
VVVGEGEKKL FGRAGGRTAL ELRKAVPLEQ GTVHLVYAVK K