Gene Memar_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0427 
Symbol 
ID4848423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp413355 
End bp413948 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content61% 
IMG OID640115102 
Product30S ribosomal protein S3Ae 
Protein accessionYP_001046342 
Protein GI126178377 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.872315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGGA AGAAACAGGT TGGAAGAAGG TTGGAAGGCT GGAAGGCCAA GAAGTGGTAC 
CGTGTCTACG TACCCGACGC CTTCGGCAAA GCCGAGATCG GCGACGCCAT CTCGGCCGAT
CCCGAGAATA TGGTCGGCCG CATCATGACC GCGACGCTCG GCGAAGTTGT GCAGGACTAC
TCCAAGTCCC ACATCAAGAT GAGGTTCAAG ATCAACAACG TGGCAGGCGA CGCCGCATAC
ACCGAGTTCG TCGGGCACGA AGTGACCCGG GACTACCTCC GGTCGATGGT CAAGCGGCGG
GCATCCCGCA TCGACACCAT CCACCCGGTC GTCAGCAAGG ACAAGAAACT CCTGCGGGTG
ACGGTCGTCT GTCTCACCCT CTCGCGGGCA GACCAGAGCC AGGTCCACGC CGTACGGCAG
GCAATCTCGC AGGCCCTCTC CGCCAGGGCG GCCGAGAGCG ACTTCGAAAC CCTGGTCAAG
GATATCGTCT CCGGCGACAT GGCACGGGAC ATCTTCAAGG CCGTCAAGAC GATCTACCCG
ATCCGCCGGG TCGAGATCAC CAAGTCCAAA CTCGAGCAGG TTGCGGCCGT ATAA
 
Protein sequence
MARKKQVGRR LEGWKAKKWY RVYVPDAFGK AEIGDAISAD PENMVGRIMT ATLGEVVQDY 
SKSHIKMRFK INNVAGDAAY TEFVGHEVTR DYLRSMVKRR ASRIDTIHPV VSKDKKLLRV
TVVCLTLSRA DQSQVHAVRQ AISQALSARA AESDFETLVK DIVSGDMARD IFKAVKTIYP
IRRVEITKSK LEQVAAV