Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0427 |
Symbol | |
ID | 4848423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 413355 |
End bp | 413948 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640115102 |
Product | 30S ribosomal protein S3Ae |
Protein accession | YP_001046342 |
Protein GI | 126178377 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.872315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGGA AGAAACAGGT TGGAAGAAGG TTGGAAGGCT GGAAGGCCAA GAAGTGGTAC CGTGTCTACG TACCCGACGC CTTCGGCAAA GCCGAGATCG GCGACGCCAT CTCGGCCGAT CCCGAGAATA TGGTCGGCCG CATCATGACC GCGACGCTCG GCGAAGTTGT GCAGGACTAC TCCAAGTCCC ACATCAAGAT GAGGTTCAAG ATCAACAACG TGGCAGGCGA CGCCGCATAC ACCGAGTTCG TCGGGCACGA AGTGACCCGG GACTACCTCC GGTCGATGGT CAAGCGGCGG GCATCCCGCA TCGACACCAT CCACCCGGTC GTCAGCAAGG ACAAGAAACT CCTGCGGGTG ACGGTCGTCT GTCTCACCCT CTCGCGGGCA GACCAGAGCC AGGTCCACGC CGTACGGCAG GCAATCTCGC AGGCCCTCTC CGCCAGGGCG GCCGAGAGCG ACTTCGAAAC CCTGGTCAAG GATATCGTCT CCGGCGACAT GGCACGGGAC ATCTTCAAGG CCGTCAAGAC GATCTACCCG ATCCGCCGGG TCGAGATCAC CAAGTCCAAA CTCGAGCAGG TTGCGGCCGT ATAA
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Protein sequence | MARKKQVGRR LEGWKAKKWY RVYVPDAFGK AEIGDAISAD PENMVGRIMT ATLGEVVQDY SKSHIKMRFK INNVAGDAAY TEFVGHEVTR DYLRSMVKRR ASRIDTIHPV VSKDKKLLRV TVVCLTLSRA DQSQVHAVRQ AISQALSARA AESDFETLVK DIVSGDMARD IFKAVKTIYP IRRVEITKSK LEQVAAV
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