| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0421 |
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| Symbol | |
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| ID | 4846811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 407126 |
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| End bp | 408199 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115096 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001046336 |
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| Protein GI | 126178371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.192636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCCC GCAACGATCA ACCTCCGTTC CCGGCTTTTC CCCCTGCGGC TCACTGTATC
TCCCGGGCCC CCAACCAGGC ACCCCTCACG CTCGTTCTCC CGTTCGGCTT TTCCAGGGAG
TTCCTGACCT CTCCCGCCGT TCTGCTCATC GAGCTCCTCC TCGTATGCAT CGCCTTCGGG
CTGCTCGGCA TCTGGCTCAA GGAGCGGGAA GTGGCCACCC GCATCGCCGG CATGGATGCA
AGCATCGAAG GTATCAGGAC AACAGGCAGT ATCCCGCCCC GCCTCCCTGC AGCCGGGGGC
GATCCGATCT CGCGGTTTGT CGAAGAGGTC AACCTGGTGC TCGTGGAGCT GGAGCGCTCC
CGGCGGGATC TCCAGGAGAG CAGGGACCGC TACCGTCTCC TCTTCGAGAG CGGGAACGAT
TTTCTGCTGG TATGCGCCGT CGGGAGGGAA GGAACGCCCT ACCGGATACT GGATGCGAAC
GCGCTCGCCT GCCGGTGCCT CGGGTACACC CGGGATGAAC TCTTCGCCCT CACTCCCGGA
TCGGTCATCC TCGTCCGGAG CGACTTCAAG AAGGGCGGCC AACGTCTCCA TTCCGCCGAC
CTGATCCCCC GGGAAGGCGA ACGGATCCCG GTCGAGGCAA GCATCCACCG CATCACCCTC
GGGGGCACGC CGGCCATCCT CATCATCGCC CGGGACGTGA CGGAGAGGCG GCGGGCCGAG
AAGGAACTGA TGGACTACCG CTATCGGCTC GAGGAACTGG TGACGCAACG GACAGAAGAA
CTCCGGGCGG CAAACGAGAG CCTCAAACGC GAGATGAGAG AGCGGGAGAG GATCGAGCGG
GAAAGAATGG AGGCATACCG GCAGATCGAG AGGAACATCG AGCAGTTCGC CGTCCTGACC
GACCACATCC GAAACCCTCT CCAGGTCGTC CAGGGGATGG CCGACCTCAT CGATGATCCG
CGAGCGGAGA AGATCCGGGA GCAGGTCAGG CAGATCAAGG CAATCCTCAG GCAGCTCGAC
GAAGGATGGG TGGAGTCGGA GAAGGTGCGG GAGTACCTGG AGCGGTACCG GTAG
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| Protein sequence | MASRNDQPPF PAFPPAAHCI SRAPNQAPLT LVLPFGFSRE FLTSPAVLLI ELLLVCIAFG
LLGIWLKERE VATRIAGMDA SIEGIRTTGS IPPRLPAAGG DPISRFVEEV NLVLVELERS
RRDLQESRDR YRLLFESGND FLLVCAVGRE GTPYRILDAN ALACRCLGYT RDELFALTPG
SVILVRSDFK KGGQRLHSAD LIPREGERIP VEASIHRITL GGTPAILIIA RDVTERRRAE
KELMDYRYRL EELVTQRTEE LRAANESLKR EMRERERIER ERMEAYRQIE RNIEQFAVLT
DHIRNPLQVV QGMADLIDDP RAEKIREQVR QIKAILRQLD EGWVESEKVR EYLERYR
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