Gene Memar_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0419 
Symbol 
ID4846037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp403791 
End bp404600 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content64% 
IMG OID640115094 
Productregulatory protein, MarR 
Protein accessionYP_001046334 
Protein GI126178369 
COG category[K] Transcription 
COG ID[COG1497] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGACT TCACTGACGA TCCTCTTTAC GTCATCCTGC GCAGCAAACG GGAGGCCACC 
CGGTTCCAGA TTCTCGTAGA GATCGCCGAA CACCAGCCGG CCGTCCGCCA GCAGGAGATC
GCCGCGAAAC TCGGCGTGAC GCCTCAGGCC GTCTCCGAGT ACATCCGGGA GCTGGTGGAC
GAAGGGCTGG TCACCGCTCA CGGCCGGGGC CGCTACGAGG TGACAAAGAG CGGGATCGAG
TGGGTCCTGC GTCACGCCGA GGCGCTCGAG GCTTATGCCC GCCATATCAA CCGGGATGTC
ATCCAGCAGG TGGCGGTCTG GACGGCTATC GCCCGGGACG ATATCCGCAA GGGAGATACG
GTCGGTGTCT TCATGCGGGA CGGGTGGCTC TATGCGACGG GAGAAGAACA GAGCGCCACC
GGCCTCGCGA CCATGGACGC GGCACCGGGA GAAGACCTCG GCGTCGCCCA GCTGAACGGC
ATCATCCAGC ACGAAGAAGG GCTTATTCAC GTCTGCAAGG TGCCGAGAGT GGAGCGGGGC
GGGTCCCGGC AGGTCAGCCC GGATCTTCTC CGGGAGGCCG TCCGGGACGC CGAGATGGTG
GGTGCCGTCG GCCTCGAGTC CTACGTGGCC CTCAGGAAGG CGGGCATCGA GCCGGATATG
TTCTTCGGTG CGCGGGAAGG GGTCGTCGAA GCGGCGTTCC ACGGTCGGGA GTGCGCAATT
CTTATCGTCG ATGAGGAGTT TACCGATTTC CTCAAGCGTC TGGAGACGGT GGGGCTCGCC
TACACGATCC ACGACCTGAT CCCGTCATGA
 
Protein sequence
MTDFTDDPLY VILRSKREAT RFQILVEIAE HQPAVRQQEI AAKLGVTPQA VSEYIRELVD 
EGLVTAHGRG RYEVTKSGIE WVLRHAEALE AYARHINRDV IQQVAVWTAI ARDDIRKGDT
VGVFMRDGWL YATGEEQSAT GLATMDAAPG EDLGVAQLNG IIQHEEGLIH VCKVPRVERG
GSRQVSPDLL REAVRDAEMV GAVGLESYVA LRKAGIEPDM FFGAREGVVE AAFHGRECAI
LIVDEEFTDF LKRLETVGLA YTIHDLIPS