Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0419 |
Symbol | |
ID | 4846037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 403791 |
End bp | 404600 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115094 |
Product | regulatory protein, MarR |
Protein accession | YP_001046334 |
Protein GI | 126178369 |
COG category | [K] Transcription |
COG ID | [COG1497] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCGACT TCACTGACGA TCCTCTTTAC GTCATCCTGC GCAGCAAACG GGAGGCCACC CGGTTCCAGA TTCTCGTAGA GATCGCCGAA CACCAGCCGG CCGTCCGCCA GCAGGAGATC GCCGCGAAAC TCGGCGTGAC GCCTCAGGCC GTCTCCGAGT ACATCCGGGA GCTGGTGGAC GAAGGGCTGG TCACCGCTCA CGGCCGGGGC CGCTACGAGG TGACAAAGAG CGGGATCGAG TGGGTCCTGC GTCACGCCGA GGCGCTCGAG GCTTATGCCC GCCATATCAA CCGGGATGTC ATCCAGCAGG TGGCGGTCTG GACGGCTATC GCCCGGGACG ATATCCGCAA GGGAGATACG GTCGGTGTCT TCATGCGGGA CGGGTGGCTC TATGCGACGG GAGAAGAACA GAGCGCCACC GGCCTCGCGA CCATGGACGC GGCACCGGGA GAAGACCTCG GCGTCGCCCA GCTGAACGGC ATCATCCAGC ACGAAGAAGG GCTTATTCAC GTCTGCAAGG TGCCGAGAGT GGAGCGGGGC GGGTCCCGGC AGGTCAGCCC GGATCTTCTC CGGGAGGCCG TCCGGGACGC CGAGATGGTG GGTGCCGTCG GCCTCGAGTC CTACGTGGCC CTCAGGAAGG CGGGCATCGA GCCGGATATG TTCTTCGGTG CGCGGGAAGG GGTCGTCGAA GCGGCGTTCC ACGGTCGGGA GTGCGCAATT CTTATCGTCG ATGAGGAGTT TACCGATTTC CTCAAGCGTC TGGAGACGGT GGGGCTCGCC TACACGATCC ACGACCTGAT CCCGTCATGA
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Protein sequence | MTDFTDDPLY VILRSKREAT RFQILVEIAE HQPAVRQQEI AAKLGVTPQA VSEYIRELVD EGLVTAHGRG RYEVTKSGIE WVLRHAEALE AYARHINRDV IQQVAVWTAI ARDDIRKGDT VGVFMRDGWL YATGEEQSAT GLATMDAAPG EDLGVAQLNG IIQHEEGLIH VCKVPRVERG GSRQVSPDLL REAVRDAEMV GAVGLESYVA LRKAGIEPDM FFGAREGVVE AAFHGRECAI LIVDEEFTDF LKRLETVGLA YTIHDLIPS
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