Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0414 |
Symbol | rplP0 |
ID | 4846607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 397202 |
End bp | 398242 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640115089 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001046329 |
Protein GI | 126178364 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0533386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTCT ATACGCACCA CCTGCCCCGG TGGAAGAAGG ACGAAGTAGA GGAGATCAAG CGCGGTATCG AGGAGCACAC GCTCGTCGGC GTCGTGGACA TGTACGGCAT TCCCGCCTCG CAGGTCCAGC AGATCCGGCG GAACCTCCGC GGCACGGCGA GGGTGAAGAT GGCCCGCAAC ACGCTGATCG AGCACGCCTT AAACGAGCTC GGCGGCAGCG TCGCGACCTT GAACGACCAC GCCGAAGGCC AGAGCGCCCT GATCTTCACG AACGAGAATC CTTTCAAGCT CTTCAAGCTG CTCGAGAAGA CCAAGACGAA GATGGCGGCG AAGCCCGGCG AGACCGCTCC CGAGGATATC GTCATCCCGA AGGGTCCGAC CAGCTTCAAG CCCGGCCCGA TCGTGGGCGA GCTCCAGCAG GTGGGCATTC CTGCAGCCAT TGAGGGCGGA AAGGTCAAGA TTCGCGAGAC GAAGACGGTC GTGAAGAAGG GCGAGGTCAT CAACAAGAAG GTTGCCGAAG CTCTCGTGAA ACTCGGCGTC AAGCCGATGG ATGTCGGCCT CATCCTGCAG GCCGCATACT ATCGCGAGAC CATCTTCACG CCGGACCTGC TCGCTATCGA TGAGGAAGTC TACGCGAACA ACATCGTGCT CGCGGCTCAG CAGGCGTTCA ACCTCTCGGT CAACGCCGTC ATTCCGACCA GACTTACCGT CGCGGCCATC ATCGGCAAGG CGGTGAGCGA GGCCCGGAAC GTGGGCGTCG AAGCGAGCAT CTACGAGAAG GATATCGTCG ATCTGATCAT CGGGCGGGCA CAGCGCGAGA TGCTGGCCGT CGCGCTCGCG GCGCAGGGCC GTGGGTTCGA GCTCGATGAG GCGACCCTGA AAGCCGCATC GGCTGCGACC GCTGCGGCAC CCGCGGCAGC AGCCCCGGCG GCAGCCGAGG ATAAGGCCGA GGATAAGGCC GAGGAAGAAG AGACGGAAGA GGAGAAGAAG GAAGAGGATG AAGAGGGCGG CATGGCCGGT CTCGGCGCCC TCTTCGGCTA A
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Protein sequence | MALYTHHLPR WKKDEVEEIK RGIEEHTLVG VVDMYGIPAS QVQQIRRNLR GTARVKMARN TLIEHALNEL GGSVATLNDH AEGQSALIFT NENPFKLFKL LEKTKTKMAA KPGETAPEDI VIPKGPTSFK PGPIVGELQQ VGIPAAIEGG KVKIRETKTV VKKGEVINKK VAEALVKLGV KPMDVGLILQ AAYYRETIFT PDLLAIDEEV YANNIVLAAQ QAFNLSVNAV IPTRLTVAAI IGKAVSEARN VGVEASIYEK DIVDLIIGRA QREMLAVALA AQGRGFELDE ATLKAASAAT AAAPAAAAPA AAEDKAEDKA EEEETEEEKK EEDEEGGMAG LGALFG
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