Gene Memar_0289 details

Gene Information

• Locus tag: Memar_0289
• ID: 4848098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 267108
• End bp: 267734
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 640114961
• Product: V-type ATP synthase subunit D
• Protein accession: YP_001046205
• Protein GI: 126178240
• COG category: [C] Energy production and conversion
• COG ID: [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D
• TIGRFAM ID: [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCTGC GAGATATCAA GCCGACCCGT TCGGAGCTGA TCAACGTCAA ACGGCGGATC 
AAGCTCTCGG AGCGCGGCTA TAACATCCTC AAGATGAAGC GCGATGGGCT TATCCTGGAG 
TTCTTCAAGG TGCTGCAACA GGCGAAAGAC AGCCGCGGCG CACTGCTGGA GCGCTACGAG 
CGTGCAATGG AGATGATCGC CCTCGCGGAG ACCGTCGAGG GCGCTATCGG GGTGAAGGCC 
GCCGCCTTTT CGACGGCGGA CGTCCCCGCC ATCTCCTTAA AAAGCAAGAA CATCATGGGC 
GTCGTCGTCC CGGAGATCCA GGCGTCCTCC GTCCGGAAGG GCGTGCTCGA CCGCGGCTAC 
GGGATGCTCG GCACGTCCGC CGTCATCGAC GAGACCGCGG AGGCGTTCGA GGATCTGCTC 
GAGGCCATCA TCGAGGCCGC CGAGATCGAG ACGACCATGA AGCGGCTGCT CGACGAGATC 
GAGAGCACCA AGCGGCGCGT GAACGCGCTC GAGTTCAAGG TGATCCCGGA ACTCTCCGAG 
GCCAGAGACT TCATCAAGAT GCGGCTCGAT GAGATGGAGC GCGAGGAGCT CTTCCGCCTG 
AAAAAGATTA AGGCACGGAG CACCTGA 

 

Protein sequence

MALRDIKPTR SELINVKRRI KLSERGYNIL KMKRDGLILE FFKVLQQAKD SRGALLERYE 
RAMEMIALAE TVEGAIGVKA AAFSTADVPA ISLKSKNIMG VVVPEIQASS VRKGVLDRGY 
GMLGTSAVID ETAEAFEDLL EAIIEAAEIE TTMKRLLDEI ESTKRRVNAL EFKVIPELSE 
ARDFIKMRLD EMEREELFRL KKIKARST