Gene Memar_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0272 
Symbol 
ID4847605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp250613 
End bp251227 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID640114944 
Productorotate phosphoribosyltransferase-like protein 
Protein accessionYP_001046188 
Protein GI126178223 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0856] Orotate phosphoribosyltransferase homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.205067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCGC TCGAAGAGCT GATCACGAAG GCAAAGGCGC TCCAGGCAGA AGGGCACACC 
CCCGGCCAGA TCTCCGACGA GCTGGGTCTC TCGATGGAGA CGGTCACCTG GCTGCTCACC 
CAGCAGAAGG GCATGGAAGC CCCGAAAGAC GTCCACATCG ATTGGGCGGC CGTAGGGAGC 
CACGGCGTGC TCTTAAACGA CATGGCGATG ATGATGCTCA AACGCTTCCT CTACCTGGAG 
GAGGGAGGAG ACGTACGTGC CATCGAGGAT CTTCCCGACA CGGTCGTCGG GATCGCGCCG 
TCGGGTGCCC CGCTCGCCAC CCTCATCGCC GCGGAGGAGG GGCTGAAACT CGCGGTATAC 
CTCCCGGCGA AGCACAGCCG GAGCGAAGCA CCAACCGGGT CGCTCTCGGG CACCTTCTCC 
GCGATCGCCG CCCAGCGGTG CATCATCGTC GACGACGTCG TCACGACCGG GACGACGCTT 
TCCGAGACGA TAGCGTTTCT CCGGCAGCAT GGGGCCACGC CGGTGGCGGT CTGGTCGCTC 
TTCGACAAGC GGGGGGCGAG GGAGATCGAC GGAGTCCCGG TCCACTCGCT CTTCGTGATA 
TCGAGGCTCG GGTGA
 
Protein sequence
MSALEELITK AKALQAEGHT PGQISDELGL SMETVTWLLT QQKGMEAPKD VHIDWAAVGS 
HGVLLNDMAM MMLKRFLYLE EGGDVRAIED LPDTVVGIAP SGAPLATLIA AEEGLKLAVY 
LPAKHSRSEA PTGSLSGTFS AIAAQRCIIV DDVVTTGTTL SETIAFLRQH GATPVAVWSL 
FDKRGAREID GVPVHSLFVI SRLG